Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1595 ATGGAAAACAAGAACAAAGACAACAACAACAGTGAAATTATGGTATCAAATTCTGAAGGAGTCTTTCATGGTTTCTCTCCCCAAAGGAAGACTAAGGAAGAAAAGGGTTTCGATTTAAATGAACCCTTAATGGATACAAGACTTGAGGCTTCTCCTCCTCGTATTGATATCAATATGGTTCCAGACTCTGAGATGGGAGAATTTGAAGACCAATCTGCTTGTGGCATGCAGATGGGAGAATTTGAAGACCAATCCGAAGGGCATGCTAGGAAAGATAGTGAACAAGTGCATTCGTCCAATGATGCGAAAAGGGTCAAGCTTAATATTGATCTTAATGCTAAAATGGGTGATGCTGAAGCGCCAATTTGTTGTTCTGAGGAAACACATTCGTTTGACTTGGAGGTGAATCCAGATCTTCCTCATACAGTCTCAAACAATATTGGTAACGAAGAGGAAGCCACTCAAGAAAACTTGTCACCTCAAGAGGATGCTGTTGATGATGGAGCTGAGTCTGGAAGAAGGAAGAGAAAGAGAACGGAGGAAAATACTTCTAGGGGAATCCGTGAGCCAAGAGTTGTAGTGCAAATTGAGAGCGAAGCGACCGTACTGGCTGATGGTTATCGCTGGCGCAAGTATGGACAGAAGGTTATCAAGGGAAATCCAAACCCTAGGAGCTACTACAAATGCACAACTGCTGGATGCTCCGTAAGGAAGCACGTGGAAAGGGATTCACGCAATTTGAAATATGTAACTACTACTTATGAGGGAAGACACAATCATGGATTGCCACCTCCTAAAAACAAAAATCAGCAAGTTGATAATAATGATGGTGGTGGTGTTGGCGGTAATGCTCTGGTGACTATTGCATTACCTGGAAATATCGGTGTCTCGAAACCTAAAGCTCAAGGGCAAACTGGGGCACCTAGTTTTCACACAAACCCTGGATTTAACAATGAGTTTCTGAGGACCGGTTTTGAAAGCTTCAACAATGACATGAATATTGGGTCTTCCTCCACCCACCAAATGTCCTCTTCTTCCTTGAATAATAGTAACATCATTCCTTATAGCTCCTATGGACTTAGTCTTAACCCTTTTGCTACCCCTCATGCTGAATCTATTCCCTCACTGTTTCCTGAACGTCCAATGTCATCACTACTTGATGTTCCTTCTTCTTCTTCTTCTCAGCCTAGACTTAATTTTAATGGGTCTAATCCAGGGTTTCCTTTCAGGGCAACAACAGATGAAAGAGACTGGTACTGGGTTCCTGAGGCTTAA 1275 0.4251 MENKNKDNNNSEIMVSNSEGVFHGFSPQRKTKEEKGFDLNEPLMDTRLEASPPRIDINMVPDSEMGEFEDQSACGMQMGEFEDQSEGHARKDSEQVHSSNDAKRVKLNIDLNAKMGDAEAPICCSEETHSFDLEVNPDLPHTVSNNIGNEEEATQENLSPQEDAVDDGAESGRRKRKRTEENTSRGIREPRVVVQIESEATVLADGYRWRKYGQKVIKGNPNPRSYYKCTTAGCSVRKHVERDSRNLKYVTTTYEGRHNHGLPPPKNKNQQVDNNDGGGVGGNALVTIALPGNIGVSKPKAQGQTGAPSFHTNPGFNNEFLRTGFESFNNDMNIGSSSTHQMSSSSLNNSNIIPYSSYGLSLNPFATPHAESIPSLFPERPMSSLLDVPSSSSSQPRLNFNGSNPGFPFRATTDERDWYWVPEA* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1595 424 MobiDBLite consensus disorder prediction 254 278 - -
Apr8g1595 424 ProSiteProfiles WRKY domain profile. 198 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr8g1595 424 MobiDBLite consensus disorder prediction 151 186 - -
Apr8g1595 424 MobiDBLite consensus disorder prediction 1 62 - -
Apr8g1595 424 MobiDBLite consensus disorder prediction 8 24 - -
Apr8g1595 424 Pfam WRKY DNA -binding domain 205 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr8g1595 424 MobiDBLite consensus disorder prediction 387 406 - -
Apr8g1595 424 Gene3D WRKY domain 188 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr8g1595 424 MobiDBLite consensus disorder prediction 166 186 - -
Apr8g1595 424 MobiDBLite consensus disorder prediction 26 42 - -
Apr8g1595 424 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 127 398 - -
Apr8g1595 424 MobiDBLite consensus disorder prediction 80 102 - -
Apr8g1595 424 SUPERFAMILY WRKY DNA-binding domain 197 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr8g1595 424 MobiDBLite consensus disorder prediction 83 102 - -
Apr8g1595 424 SMART WRKY_cls 203 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr8g1595 424 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 127 398 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1595 Apr-Chr8 25857064 25864202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1595 166 269 WRKY Transcription Factor Family AT4G26640 41.905 2.10e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr8g1595 WRKY 4.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1595 K18835 - gmx:100800211 223.402