Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1594 ATGGTTGGAGTGGTGATATCGATGGAAGAGGAAGAGGAAGTTCTGGTTGCTCCAAACAACTTTTCAATGGTTGATGAGGGCATTTATCGCTCAAGCTTGCCACAACCTTCCAATTTCGCTTTCCTCAAAACTCTCAATCTTCGATCGATCATATACTTGTGCCCCGAACCCTATTCACCACAAAATTTAGAGTTCCTTCGATCACACAATATTCAGCTCTTTCACTTTGGTATTGAAGGCAAGACGGATCTTTCTGTCTCAGCCGTCAAGGATACTATCTTGGAGGCTCTCAAAGTTTTAATTGATGTGAGAAATCACCCAGTTTTGATCCACTGCAATCGGGGAAAGCATCGAACTGGTTGCGTTGTTGGTTGCTTGAGAAAATTGCAGAATTGGTGTTTATCTTCTGTGTTCGAGGAGTATGAGCGATTTGCTGGTGCTAAATCAAGGGTCACAGATTTAAGGTTCATAGAAACGTTTAACATCTTAAGCCTAAGGCAGTGTCTTAACAGCATCATATACCGGTACCTAGGTCGTGCTTCAAAGAAGCCGCGGTTGCTTTATAAAGATGAGAATTTACGCAAACCCCAATTGACATTAGTTTAG 606 0.4208 MVGVVISMEEEEEVLVAPNNFSMVDEGIYRSSLPQPSNFAFLKTLNLRSIIYLCPEPYSPQNLEFLRSHNIQLFHFGIEGKTDLSVSAVKDTILEALKVLIDVRNHPVLIHCNRGKHRTGCVVGCLRKLQNWCLSSVFEEYERFAGAKSRVTDLRFIETFNILSLRQCLNSIIYRYLGRASKKPRLLYKDENLRKPQLTLV* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1594 201 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 10 183 - -
Apr8g1594 201 Pfam Tyrosine phosphatase family 15 164 IPR004861 -
Apr8g1594 201 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 16 160 IPR029021 -
Apr8g1594 201 Gene3D Protein tyrosine phosphatase superfamily 14 163 IPR029021 -
Apr8g1594 201 PRINTS Plant and fungal dual specificity phosphatase signature 15 32 IPR020428 GO:0016791
Apr8g1594 201 PRINTS Plant and fungal dual specificity phosphatase signature 52 65 IPR020428 GO:0016791
Apr8g1594 201 PRINTS Plant and fungal dual specificity phosphatase signature 71 85 IPR020428 GO:0016791
Apr8g1594 201 PRINTS Plant and fungal dual specificity phosphatase signature 88 102 IPR020428 GO:0016791
Apr8g1594 201 CDD PFA-DSP_Siw14 15 161 - -
Apr8g1594 201 PANTHER TYROSINE-PROTEIN PHOSPHATASE 10 183 - -
Apr8g1594 201 ProSitePatterns Tyrosine specific protein phosphatases active site. 110 120 IPR016130 GO:0016311|GO:0016791
Apr8g1594 201 ProSiteProfiles Dual specificity protein phosphatase domain profile. 20 174 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1594 Apr-Chr8 25852133 25853846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1594 1 197 Protein tyrosine phosphatase (PTP) family AT3G02800 62.437 1.39e-92 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1594 K18045 - gmx:100808199 325.479