Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1589 ATGTTAAAATTCTTGAAAGAAGTGGTGGGTGGATCTGGAACGGGCCTCAAAGATCTCCCATACAACATCGGCGAACCTTACCCTTCTGCTTGGGGCTCTTGGCTTCATTGTCGCGGCACTTCCAAGGATGATGGTTCTCCGGTGTCAATATTTTCTCTATCTGGGACCAATGCTCAGGACGGACATTTAGCTGCGGGTCGTAATGGTGTCAAGCGTTTACGCACTGTTAGGCATCCAAATATTTTGTCGTTTCTTCACAGCACGGAGATTGAAACCTTTGATGCCGGTTCTCCTAAGGTTACAATTTATATTGTGACTGAACCTGTTATGCCGCTGTCGGACAAGATTAGGGAGTTGGGTCTCGAAGGTACACAAAGGGATGAATATTATGCTTGGGGGCTGCATCAAATAGCAAAAGCTGTGAGCTTCTTAAATAACGATTGTAAACTTGTTCATGGTAATGTTTGTTTGGCTAGTGTTGTTGTCACACAAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTATCCGAGTTTGATGGGAGTAGTGAAACTTCCTCTGGGCAAATGCTGCAATATGCATGGCTTGTTGGATCACAATACAAACCAATGGAGCTTGCAAAATCTGACTGGCCTGCAATTAAGAAGTCACCTCCATGGGCCATTGATTCTTGGGGCATGGGTTGCCTAATCTATGAGCTATTTTCTGGTATAAAGTTGGGCAAAACGGAGGAGTTGCGCAACACTGCCTCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGGCTACTGAGTTCCATGCCTTCTCGTAGATTAAATACAGCTAAGCTTATAGAAAACAGTGAGTATTTTCAAAATAAGTTGGTAGACACAATACATTTCATGGAAATTCTTAGTTTGAAAGATAGTGTTGAGAAAGACACCTTCTTCCGCAAGCTACCAAATTTAGCAGAGCAGCTTCCTCGTCAGATTGTGTTGAAAAAGTTACTTCCTTTATTAGCTTCTGCACTTGAATTTGGTTCAGCTGCTGCGCCCGCTTTGACTGCAATATTGAAAATGGGTTCCTGGCTTTCAGCTGATGAGTTCCGTGTCAAGGTGCTTCCAACAATTGTTAAACTCTTTGCCTCCAATGATCGAGCTATTCGAGTTGCCCTTCTTCAACATATTGATCAATATGGGGAGTCATTATCAGCTCAAATTGTTGATGAGCAGGTTTACCCCCACGTTGCTACTGGGTTTGCTGATACATCTGCTTTTCTGAGGGAACTTACACTCAAGTCCATGCTAATTCTGGCTCCAAAACTGTCTCAAAGGACCATCTCAGGGTCATTATTAAAGCATTTGTCAAAGTTACAGGTTGACGAAGAACCAGCTATACGAACAAATACTACCATCTTATTGGGAAATATTGCAAACCACTTAAATGAAGGGACAAGAAAGAGAGTGTTGATTAATGCATTTACAGTCCGTGCTTTACGTGATACCTTTCCACCTGCTCGAGGAGCAGGTATTATGGCCTTATGTGCCACTAGTTCCTACTATGACATCACAGAAATTGCAACTCGGATTCTTCCTAATGTTGTTGTACTCACAATTGATCCTGACAGTGATGTTCGATCTAAGGCATTTCAAGCTGTTGATCAATTTTTGCAGATGGCGAAGCAATATTATGAAAAGACAAATACAGCAGAGGCTACTGAGGCTTCAGGCATGGGAATCTCATCAATTCCAGGAAATGCTAGTTTACTTGGATGGGCCATGAGCTCCTTGACTCTGAAGGGTAAACCTTCTGATCATCCTCCAGTTGCTTCTGTGAGTTCTAGTATGCCTGCTCCAACATCTTCTAATGCCAGCTCAGCTGTAGATACTCCTTCAACAGCACCTGTTCGTGTAAGCTCCACAACAGATTTTGCTGAACATCCCATTCCGACATCCCCAACATCAACAGATGGCTGGGGAGATCTAGAGAATGGAATTGACGAGGATCATGAAAATGACAAGGATGGATGGGATGATCTGGAACCACTTGAAGAAATAAAGCCAACTCCAGCTCTTGCTAACATTCAAGCAGCTCAAAGGCGGCCAGTTTCTCAACCTGTTTCACAGACAAAACAAGCCTCAAGTTCGCGTTCCAAAAGTACACCAAAGTTGAGCAAGGATGAAGATGATGATTTGTGGGGTTCCATAGCGGCTCCTGCTCCAAAAACTTCAAAACCTTTAAATTTAAAATCAACTGGAACTGATGATGATGATCTTTGGGCTGCCATTGCTGCTCCTGCACCCACTACTAAGGCCAAGCCCTTATCAGCTGGCCGAGGTCGCGGTGCCAAACCCGCCGCCCCAAAATTAGGTGCTCAGCGGATAAACCGGACATCATCCGGGATGTAA 2388 0.4397 MLKFLKEVVGGSGTGLKDLPYNIGEPYPSAWGSWLHCRGTSKDDGSPVSIFSLSGTNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEIETFDAGSPKVTIYIVTEPVMPLSDKIRELGLEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFDGSSETSSGQMLQYAWLVGSQYKPMELAKSDWPAIKKSPPWAIDSWGMGCLIYELFSGIKLGKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNTAKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTAILKMGSWLSADEFRVKVLPTIVKLFASNDRAIRVALLQHIDQYGESLSAQIVDEQVYPHVATGFADTSAFLRELTLKSMLILAPKLSQRTISGSLLKHLSKLQVDEEPAIRTNTTILLGNIANHLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEIATRILPNVVVLTIDPDSDVRSKAFQAVDQFLQMAKQYYEKTNTAEATEASGMGISSIPGNASLLGWAMSSLTLKGKPSDHPPVASVSSSMPAPTSSNASSAVDTPSTAPVRVSSTTDFAEHPIPTSPTSTDGWGDLENGIDEDHENDKDGWDDLEPLEEIKPTPALANIQAAQRRPVSQPVSQTKQASSSRSKSTPKLSKDEDDDLWGSIAAPAPKTSKPLNLKSTGTDDDDLWAAIAAPAPTTKAKPLSAGRGRGAKPAAPKLGAQRINRTSSGM* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1589 795 SMART serkin_6 37 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1589 795 MobiDBLite consensus disorder prediction 593 674 - -
Apr8g1589 795 MobiDBLite consensus disorder prediction 689 795 - -
Apr8g1589 795 ProSiteProfiles Protein kinase domain profile. 3 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1589 795 Gene3D Transferase(Phosphotransferase) domain 1 112 280 - -
Apr8g1589 795 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Apr8g1589 795 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 793 - -
Apr8g1589 795 MobiDBLite consensus disorder prediction 601 652 - -
Apr8g1589 795 Gene3D - 282 561 IPR011989 -
Apr8g1589 795 SUPERFAMILY Protein kinase-like (PK-like) 37 287 IPR011009 -
Apr8g1589 795 MobiDBLite consensus disorder prediction 691 713 - -
Apr8g1589 795 SUPERFAMILY ARM repeat 293 551 IPR016024 -
Apr8g1589 795 MobiDBLite consensus disorder prediction 656 674 - -
Apr8g1589 795 PANTHER - 1 793 - -
Apr8g1589 795 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1589 Apr-Chr8 25758737 25771033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1589 70 291 MAP Kinase Kinase Kinase AT5G66850 24.576 5.55e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Apr8g1589 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1589 K08876 - gmx:100792884 1372.07