Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1582 ATGAATTGCTTCCCGTGTTGTGGCCCTCAAAAAAGTAAGAGCAGCATAAGCAGGAGTGAGCATGGTTCTCCACCACCACCGGAAACATTTGCAACAAAAACACCACCAGATATTAAGAAACCAAAACCAGAGGAGGCAAACCAAGTTGAGACTCCAAATATCCAAGCTCAGAATTTCACTTTCCGTGAGCTAGCAACTGCAACAAAGAATTTCCGTCAGGATTGTTTGATCAGTGAAACGGGATTTGGTAGAGTATACAAAGGGATAATACCTGCCACAGGCCAGGTTGTGGCCGTGAAGCAAATCGACCGAAATGGGATCCAATGCACTAGTAAGGAATTTCTGGCTGAGGTTGCAACGCTAAGTAACTTGCACCAAGAAAATCTGGTGAATCTCATTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTGTTTGAGTTATTTCAAGGGCGTACTCTAGAGAACCGTCTTTTCGAGAATAAAGAGGGGGAGGCTCCACTAAATTGGTTTGACAGAATGAAAATAGCAGCTGGTGCTTCTAAAGGACTAGAGTACTTGCACAACAGTGCCAATCCTGCAGTTATATTCCGGGACTTGAAAGCAACCCACATCATACTGGACAATGATATCATTGTAAAACTATGTGATTTTGGATTGGCCAGGCTTTCTGGTGCAGACAAGATGAACCATGCACCTCCAAGAGTTATGGGTACCTATGGTTACTGTGCTCCAGAGTATGTAAGAACAGGTCAATTTACCGTGAAATCAGACGTATACAGCTTCGGAGTTGTCTTGCTAGAGCTCATAACTGGAAGACGAGCCATTGACACGACAAGATCAAATGACGAACAAAATCTAGTTTCATGGGCACAACCCTTGTTCAGGGACCCCAAAAGATATCCAGATATGGCAGATCCAATTCTTAATAAACAGTTCCCAGAAAAGGATCTCAATCAAGTTGTTGCAATAGCAGCCATGTGTTTACAGGAGGAAGCAGAAGCTCGACCTTTGATCAGTGATGTTGTAACTGCACTCAGTTTTCTTTCCACGGCTCCTACAGAAGTTATTCCACCCTCTCTTCCCCCTGCCACCTCTATCTCTAAGGAGAGTGCTGCCGGTGATAGTGAAAGTGAAAGTGATACAGAATCTGGCAAGGGGAGCCGCAGGAGTGTTGCAGCCAGTGCAAAGAACAGAAAGAGTGATGTAGATAATGAAGATGATTATTATAAGAATGATGACCAACACGGTTCAGATAGCCAACTTCAACCAGCGGTTTCCTCTAAAACAAGCCGCAAAAGCAACTCCAGATCAAGGAAAGAAAAGCTTAGTTCAGATTCAGGAGATGGAAGCATTTCTTCCAGCAGCAAAAGCAGTAGGAAATCACATGGTGCTGTTGGTGATCTAAGCCACAAGAACAGCAGAAAATCTTCTATCAAAGATTTAAGCCAGAAGAGCAGTAAAAAATCTTCTATCAAAGATTTAAGCCAAAAGAGCAGCAAGAAATCTTCTATCAAAGATTTAAGCCAGAAGAGCAGCAGAAAATCTTCCATCAAAGAATCAGGCCACAAGAGCAGTAGAAAATCTTCTGTCAGGGTTTTAAGCCACAAGAGTAGCATGGAATCGGAGGAAGGAAGCATTTCCTCAAGCTGCCGTAGCAGCAGTGTGGTGTCAGAGGATGAAAGTGTTATGTCAGAGCATAGCAGCAGGATTCTATCACACGGAAACATGTCTTTTGGCCATGTCAGTAGTGTTCACTCAGACCACAGCAGCAGCAAAAGGACCGAACAAGACAGCATACATTTAGACCATGCAACCAGCTTGGGATCTGATGCGGGAAGTGGTCACCCTTTTGACCGAATTAGCAGCAGTGGATCAGATTAA 1884 0.4379 MNCFPCCGPQKSKSSISRSEHGSPPPPETFATKTPPDIKKPKPEEANQVETPNIQAQNFTFRELATATKNFRQDCLISETGFGRVYKGIIPATGQVVAVKQIDRNGIQCTSKEFLAEVATLSNLHQENLVNLIGYCADGDQRLLVFELFQGRTLENRLFENKEGEAPLNWFDRMKIAAGASKGLEYLHNSANPAVIFRDLKATHIILDNDIIVKLCDFGLARLSGADKMNHAPPRVMGTYGYCAPEYVRTGQFTVKSDVYSFGVVLLELITGRRAIDTTRSNDEQNLVSWAQPLFRDPKRYPDMADPILNKQFPEKDLNQVVAIAAMCLQEEAEARPLISDVVTALSFLSTAPTEVIPPSLPPATSISKESAAGDSESESDTESGKGSRRSVAASAKNRKSDVDNEDDYYKNDDQHGSDSQLQPAVSSKTSRKSNSRSRKEKLSSDSGDGSISSSSKSSRKSHGAVGDLSHKNSRKSSIKDLSQKSSKKSSIKDLSQKSSKKSSIKDLSQKSSRKSSIKESGHKSSRKSSVRVLSHKSSMESEEGSISSSCRSSSVVSEDESVMSEHSSRILSHGNMSFGHVSSVHSDHSSSKRTEQDSIHLDHATSLGSDAGSGHPFDRISSSGSD* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1582 627 ProSiteProfiles Protein kinase domain profile. 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1582 627 MobiDBLite consensus disorder prediction 532 586 - -
Apr8g1582 627 PANTHER OS07G0668900 PROTEIN 1 556 - -
Apr8g1582 627 MobiDBLite consensus disorder prediction 587 601 - -
Apr8g1582 627 SUPERFAMILY Protein kinase-like (PK-like) 49 349 IPR011009 -
Apr8g1582 627 PANTHER RECEPTOR-LIKE KINASE LIP1 1 556 - -
Apr8g1582 627 MobiDBLite consensus disorder prediction 1 53 - -
Apr8g1582 627 Gene3D Phosphorylase Kinase; domain 1 41 148 - -
Apr8g1582 627 Gene3D Transferase(Phosphotransferase) domain 1 150 356 - -
Apr8g1582 627 MobiDBLite consensus disorder prediction 464 527 - -
Apr8g1582 627 MobiDBLite consensus disorder prediction 447 463 - -
Apr8g1582 627 MobiDBLite consensus disorder prediction 7 22 - -
Apr8g1582 627 MobiDBLite consensus disorder prediction 416 432 - -
Apr8g1582 627 Pfam Protein tyrosine and serine/threonine kinase 77 345 IPR001245 GO:0004672|GO:0006468
Apr8g1582 627 MobiDBLite consensus disorder prediction 395 415 - -
Apr8g1582 627 MobiDBLite consensus disorder prediction 354 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1582 Apr-Chr8 25675838 25678425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1582 1 377 Glycoside Hydrolase AT3G07070 56.378 6.21e-148 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Apr8g1582 Pkinase 5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1582 - - gmx:100804526 640.958