Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1570 ATGGAAGGCAATGAGAGCGAACTTAGCTCCTTCTTCGACCAGAGCAACACCGTCACCGTCACCGTCACGGCCTCGCCAACCAAAGGCTTGTTCCCAAGCAGTGATGTTTCACTCTCACAGTCACAATCACAGTCGCAGACGGAGTCACACGTGCCTTACCCTCATTCCCAACTGCAAGCCCAGACGCCGAAGAAGAAGCGAGGGAGACCAAGAAAGTACGAGTCGCCAGCGCAAGCTCTCGCCGCAAAGAAGGCTTCTTCTACGTCGTCGTTTCCATCTTCCAACAAATCCCACTCCTCTCTTCTAGGTAGTTCAGGACACGGCTTCACTTCGCATGTCATTACTGTTGCTGCTGGTGAGGATGTCAGTCAAAAAATTATGTCGTTCATGCAACAAAGAAGGCGGGCAATGTGCATTCTGTCTGCATCTGGTTCCATATCTAATGCCTCACTTCGTCAGCCAGCAACCTCAGGAGGCAATATTACATATGAGGGTTGCTTTGAGATTGTTTCTCTTTCTGGTTCCTATGTTCTCAATGAACGTGGGATTCGGACTGGTGGTCTCAGTGTATGCTTATCAAATACTGATGGGCAGTTCATTGGTGGAGGCATTGTTGGACCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGTACATTTTTTATTGACCCCAAGAAGGACACTAGGACTGGAATAAGAGAGGATGTTTCTTCCAACAAGTTGCCACCACCAGTTGGTGAGCCAGCATCCAGTTTAGGTTTTCAAGCAGCAGTTGACGTTTCCAGTGGGAACCCAGTCCGGGGAAATGAGGAGCATCAAGCTATTGGGGGAAGTCATTTCATGCTTCAACAGTGTGGTCTGCAAATGACGCCTTCTCATTCCTCAGACTGGGGAGATCGTTCAGATTCAATAAATGCTGGCTTTGAGCTGACAGGAAGAATAGGTCATGGAGCACACTTGTCCCCTGAGAATGGGGACTATGAACAAATACCTGATTGA 1002 0.487 MEGNESELSSFFDQSNTVTVTVTASPTKGLFPSSDVSLSQSQSQSQTESHVPYPHSQLQAQTPKKKRGRPRKYESPAQALAAKKASSTSSFPSSNKSHSSLLGSSGHGFTSHVITVAAGEDVSQKIMSFMQQRRRAMCILSASGSISNASLRQPATSGGNITYEGCFEIVSLSGSYVLNERGIRTGGLSVCLSNTDGQFIGGGIVGPLKAAGPVQVIVGTFFIDPKKDTRTGIREDVSSNKLPPPVGEPASSLGFQAAVDVSSGNPVRGNEEHQAIGGSHFMLQQCGLQMTPSHSSDWGDRSDSINAGFELTGRIGHGAHLSPENGDYEQIPD* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1570 333 CDD DUF296 110 221 IPR005175 -
Apr8g1570 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 325 - -
Apr8g1570 333 MobiDBLite consensus disorder prediction 25 103 - -
Apr8g1570 333 SUPERFAMILY AF0104/ALDC/Ptd012-like 108 222 - -
Apr8g1570 333 MobiDBLite consensus disorder prediction 25 61 - -
Apr8g1570 333 Pfam Plants and Prokaryotes Conserved (PCC) domain 111 221 IPR005175 -
Apr8g1570 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 325 IPR039605 GO:0003680
Apr8g1570 333 Gene3D - 110 240 - -
Apr8g1570 333 ProSiteProfiles PPC domain profile profile. 103 245 IPR005175 -
Apr8g1570 333 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1570 Apr-Chr8 25536728 25543847 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1570 18 333 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 43.207 4.03e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1570 - - gmx:100809675 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1570 8 25536728 25543847 Apr8g1570 8 25536728 25543847 ECH