Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1568 ATGGCGAACCGGTGGTGGACCGGGTCTGTGGGTCTGGAAAATTCGGGTGACTCGATTAAAAAACCGGATCTGGGGTTTTCCATGAACGACAACGGGGGAGTAGGGGAAGAAGAAGAGGAGAAAGAGAACAGCGATGAACCCAAAGAGGGAGCGATTGAAGTGGCTACTACGCGCCGCCCGAGAGGTCGACCACCGGGTTCAAAGAACAAACCGAAACCGCCAATATTTGTCACCAGAGACAGCCCTAACGCGCTGCGAAGCCACGTCATGGAGATAGCCACCGGAGCTGACATCACCGACTGCGTGGCGCAGTTTGCAAGACGGCGCCAAAGAGGCGTGTGCATTCTCAGCGGCAGTGGCATCGTTGTCAACGTCACGCTCCGGCAACCGACGGCTCCGGGCGCTGTCATGGCGCTTCACGGCCGGTTCGATATACTCTCGCTGACCGGTTCGTTTTTGCCCGGCCCGTCTCCTCCCGGCGCGACCGGTTTAACCATTTACCTCGCCGGAGGTCAAGGACAGATCGTCGGCGGCGGGGTGGTAGGTCCCTTGGTGGCGGCGGGACCGGTTTTACTAATGGCGGCTACGTTTTCGAATGCAACATACGAGAGATTGCCATTGGAGAATGATGATTTGGATGGTCAGGGACACGGTGGTGGGTCTCCGCCGGGAATGGGTGGCGGTGGCGGAGAAGCGTCATCGTCGATTCCGGTGTATGACAATAATGGTAATAATAATAATGTTCCTCCGAATTTGGGTATTCCAAATGGGCAACATCTGAATCATGAAGCTTATAATTCTCCTTGGGGTCATGCTCATCATGCCAGTGTTAGACCACCCTTCTAA 846 0.5556 MANRWWTGSVGLENSGDSIKKPDLGFSMNDNGGVGEEEEEKENSDEPKEGAIEVATTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEIATGADITDCVAQFARRRQRGVCILSGSGIVVNVTLRQPTAPGAVMALHGRFDILSLTGSFLPGPSPPGATGLTIYLAGGQGQIVGGGVVGPLVAAGPVLLMAATFSNATYERLPLENDDLDGQGHGGGSPPGMGGGGGEASSSIPVYDNNGNNNNVPPNLGIPNGQHLNHEAYNSPWGHAHHASVRPPF* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1568 281 MobiDBLite consensus disorder prediction 207 281 - -
Apr8g1568 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 273 IPR014476 GO:0003680
Apr8g1568 281 Gene3D - 85 213 - -
Apr8g1568 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 11 273 - -
Apr8g1568 281 SUPERFAMILY AF0104/ALDC/Ptd012-like 82 212 - -
Apr8g1568 281 ProSiteProfiles PPC domain profile profile. 82 218 IPR005175 -
Apr8g1568 281 MobiDBLite consensus disorder prediction 1 81 - -
Apr8g1568 281 MobiDBLite consensus disorder prediction 235 254 - -
Apr8g1568 281 CDD DUF296 86 169 IPR005175 -
Apr8g1568 281 Pfam Plants and Prokaryotes Conserved (PCC) domain 86 199 IPR005175 -
Apr8g1568 281 PIRSF ESCAROLA 13 281 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1568 Apr-Chr8 25484759 25485604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1568 1 281 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 55.960 5.64e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1568 - - gmx:100795097 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0861 4 6945101 6946267 Apr8g1568 8 25484759 25485604 ECH
Apr8g1568 8 25484759 25485604 Apr8g1568 8 25484759 25485604 ECH