Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1561 ATGTCAGAACCTAACCAACAGCAGGAAGAAATGGACCAAGCGGTTCTGGACGACATAATCAATCGTCTTCTCGAAGTTCGCGGCCGTCCGGGGAAGCAGGTGCAGCTGTCGGAGTCGGAGATCCGCCAGCTCTGTGCAGCTTCCAGAGAGATTTTCTTACAGCAACCTAATTTGTTGGAACTTGAAGCGCCCATTAAGATTTGTGGTGATGTTCACGGTCAATATTCTGATCTTTTAAGGCTTTTTGAGTATGGTGGATTACCTCCTGTAGCTAACTACTTATTTTTGGGGGATTATGTGGATAGAGGGAAGCAGAGTTTGGAAACAATATGCCTTCTCCTATCATATAAAATAAAATATCCTGAGAATTTTTTCCTTTTGAGGGGTAACCATGAATGTGCTTCAATTAACCGTATATATGGATTTTATGACGAGTGTAAAAGAAGGTTCAATGTAAGGTTATGGAAGACATTTACAGAATGCTTCAATTGCCTTCCTGTGGCAGCCCTCATTGATGAAAAGATTTTGTGCATGCATGGGGGTCTTTCTCCTGACTTACACAATTTGGATCAGATTAGAAATCTGCAGCGGCCCATTGATGTGCCTGATACAGGTTTGCTTTGCGATCTCCTCTGGTCAGATCCAAGCAAAGATGTTCAAGGCTGGGGAATGAATGACAGGGGAGTTTCATATACATTTGGTGCTGATAAGGTCTCAGAGTTTCTTCAGAAACATGATTTGGATCTTGTTTGTCGTGCTCATCAGGTGGTGGAGGATGGGTATGAGTTCTTTGCTAACCGACAGCTTGTAACAATATTTTCGGCACCTAATTATTGTGGAGAGTTTGACAATGCGGGGGCTATGATGAGTGTTGATGAAACACTAATGTGCTCTTTTCAAATATTGAAGCCAGCAGATAAAAAAGCAAAGCTCAATTTTGGAAGTACTGCCACTAGTAAGCCAGGAAACTCTCCAGCAGGCGTAAAGTCCTTCATGGGTACAAAAGTATGA 1011 0.4253 MSEPNQQQEEMDQAVLDDIINRLLEVRGRPGKQVQLSESEIRQLCAASREIFLQQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPVANYLFLGDYVDRGKQSLETICLLLSYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTECFNCLPVAALIDEKILCMHGGLSPDLHNLDQIRNLQRPIDVPDTGLLCDLLWSDPSKDVQGWGMNDRGVSYTFGADKVSEFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKAKLNFGSTATSKPGNSPAGVKSFMGTKV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1561 336 Pfam Calcineurin-like phosphoesterase 64 256 IPR004843 GO:0016787
Apr8g1561 336 ProSitePatterns Serine/threonine specific protein phosphatases signature. 127 132 IPR006186 GO:0016787
Apr8g1561 336 PRINTS Serine/threonine phosphatase family signature 64 91 IPR006186 GO:0016787
Apr8g1561 336 PRINTS Serine/threonine phosphatase family signature 93 120 IPR006186 GO:0016787
Apr8g1561 336 PRINTS Serine/threonine phosphatase family signature 126 150 IPR006186 GO:0016787
Apr8g1561 336 PRINTS Serine/threonine phosphatase family signature 160 186 IPR006186 GO:0016787
Apr8g1561 336 PRINTS Serine/threonine phosphatase family signature 189 216 IPR006186 GO:0016787
Apr8g1561 336 PRINTS Serine/threonine phosphatase family signature 246 266 IPR006186 GO:0016787
Apr8g1561 336 PRINTS Serine/threonine phosphatase family signature 268 284 IPR006186 GO:0016787
Apr8g1561 336 SMART pp2a_7 36 306 IPR006186 GO:0016787
Apr8g1561 336 Gene3D - 7 315 IPR029052 -
Apr8g1561 336 SUPERFAMILY Metallo-dependent phosphatases 31 309 IPR029052 -
Apr8g1561 336 Pfam Serine-threonine protein phosphatase N-terminal domain 16 62 IPR031675 -
Apr8g1561 336 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 8 330 - -
Apr8g1561 336 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 8 330 - -
Apr8g1561 336 CDD MPP_PP1_PPKL 15 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1561 Apr-Chr8 25409880 25415173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1561 65 250 Calmodulin-binding Proteins AT5G63870 33.333 4.14e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1561 K06269 - gmx:100799218 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0858 4 6929556 6934367 Apr8g1561 8 25409880 25415173 ECH
Apr8g1561 8 25409880 25415173 Apr8g1561 8 25409880 25415173 ECH