Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1541 ATGCAAACCCACCTTCTGCTCTTCTATTGTTACGTTGGCCTCTCTCTTGTTTTTGCTGCAGATGATGAATTGTCAACTCTTCTCTCAATCAAATCCAATCTCATTGATCCAATGAACTATCTGAAGGACTGGCAACTACCAAGCAATGTGACACAGCAAGGTTCATACCATTGTAACTGGACTGGAGTTGGTTGCGACTCTAAAGGTTTGGTGGAAAGTCTTGACCTCTCGAACATGAACCTTAGTGGTCGTGTTTGGGACCATATTCAATTCCTTTCAAGCCTATCTTCTTTCAACATAAGCTGTAACAACTTTGCTTCATCACTGCCCAAATCACTGTCCAACCTCACCTCTCTGAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTTCCCACTGGTCTTGGAAGAGCTGCAGGACTGATATCAATTAACGCATCAAGCAATGATTTTTCGGGCTTTCTTCCTGAAGATATTGGAAATGCAACATTGCTTGAGAGTCTTGATTTTCGAGGGGGCTATTTTATAAGTTCAATCCCCAGGAGTTTTAAGAATTTGCAGAAACTCAAATTTCTAGGCCTTTCAGGCAATAACTTCACAGGGAGGATTCCAGGATATTTAGGGGAACTTACTTCTCTGGAGACATTGATTATGGGATACAATGAGTTTGAAGGTGAGATCCCTTCAGAGTTTGGCAACTTGACCAGTCTTCAATACCTTGACTTGGCTGTAGGCGGTCTCAGTGGAAAAATTCCACCTGAATTGGGTAAGGTGAAAAAACTCACCGTAATTTACTTGTATCATAACAAATTCGCAGGAAAAATACCACCTCAATTTGGCAACATTACTTCACTGGTATATTTGGACCTCTCTGACAATCAGATCTCAGGAGAGATTCCGCAAGAATTTACTAAATTGGAAAATCTTCAGCTCTTAAATTTGATGAGCAACAAACTAACTGGTCCTGTACCAGAGAAGCTTGGAGAATTGAAAAATTTACAGGTGCTTGAGTTATGGAAAAATTCTTTACAAGGTCCTTTGCCACTAAACCTTGGACAGAACTCTCCTTTGCAGTGGTTGGATGTGTCCTCTAACTCTTTATCAGGGGAGATCCCTCCAGGTTTGTGCACAAAAGGCAATCTCACTAAACTAATCCTCTTCAACAATTCCTTCACTGGTTCCATTCCAAGTGGACTTGCAAACTGTTCGTCTCTGGTGCGTGCTCGGATTCAGAACAATCTTATTTCTGGAACTATTCCAGTTGGATTTGGAAACCTCCTGGGCCTTCAACGGCTGGAGTTGGCAAAGAACAACTTCACTGGGCAAATTCCTACAGATATTACCTCATCCACATCACTGTCTTTCATTGATGTATCTTGGAACCACCTTGAGTCATCTCTACCGTCAGATATTCTTTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCACAACAATTTTGGAGGAAACATCCCTGACGAGTTCCAGAATTGTCCATCTCTCTCAGTGCTGGATCTTTCAAACACCCATATATCTGGCACAATTCCAGAAAGTATTGCTTCTTGTCAAAAATTAGTGAACCTTAACCTTCGAAACAACGAATTGACGGGTGGAATCCCCAAATCAATCACAAACATGCCCACCTTATCTGTTCTTGATCTGTCCAACAATTCACTGACTGGCAGGATACCTGAAAACCTTGGCAGCTCCCCAGCTCTAGAAATGCTGAACCTGTCTTATAACAAACTTGAAGGCCCTGTACCCTCAAATGGGATGTTGGTGACCATAAATCCTAATGATCTTATTGGAAATGCAGGCCTTTGTGGAGGCATTCTCCCTCCATGTTCTGCCAGTTTGGCTGTGACACGCCAGCGAAGGAGCTCACATATCAGACACATCATCATTGGTTTTTTGACAGGCATTTCAGTGATTTTCTCTCTTGGTGCTGTATATTTTGGTGGTAGATGGGTATACAAGAGATGGTACTTGTATAATAATTTTATCCATGATTGGTTCAAACAAAGCAATGAAGATTGGCCCTGGAGGTTAGTAGCATTCCAGAGGATCAGTTTCACTAGTAGTGACATCCTAACTTGCATAAAGGAATCAAATGTCATAGGCATGGGGGGCACAGGTATTGTGTACAAAGCTGAAATACATAGACCTCACATAACCGTAGCCGTGAAGAAACTATGGAGGTCAAGGACAGACATAGAAAATGGCAATGATGTATTAAGAGAAGTGGAACTTCTGGGGAGACTTAGGCATAGGAATATTGTAAGACTGTTGGGGTATGTACACAATGAAAGGGATGTGATGATGGTTTACGAGTACATGCCTAACGGGAATCTTGGAACAGCCCTGCATGGAGAACAATCAGCAAGGTTGCTTGTTGACTGGGTCTCAAGGTACAATATAGCTCTTGGAGTTGCACAAGGCCTCAACTACCTCCACCATGATTGTCACCCACCAGTTATTCACAGGGATATCAAGTCTAACAACATACTCCTTGACGCAAATTTGGAGCCAAGAGTAGCAGATTTCGGGTTGGCAAGGATGATGATCCAAAAGAATGAGACTGTTTCAATGGTTGCTGGGTCATATGGATATATCGCACCAGAATATGGATACACTCTCAAGGTTGACGAAAAGATTGACATATATAGTTACGGAGTGGTACTTTTGGAGCTCGTAACTGGTAAAATGCCTTTAGATCCTGCATTTGAAGAATCTATCGACATTGTCGAATGGATAAGGAAGAAGAAAAACAACAAAGCTTTGTTAGAAGCACTGGATCCTACTATAGCTACTCAGTGCAAACATGTCCAAGAAGAAATGCTTCTTGTACTTCGTATTGCACTTCTATGTACCACAAAGCTTCCCAAGGAAAGACCATCCATGAGGGACATCATCACAATGCTTGGAGAGGCAAAACCAAGACGGAAAAGTGTTTGCCATAATGGGGAACAAGACAGTAGTAGCATGGAAAAGCCAACGATCTTTACCTCTTCCCCAGTAGTGAGTCTTCTGTAG 3039 0.4222 MQTHLLLFYCYVGLSLVFAADDELSTLLSIKSNLIDPMNYLKDWQLPSNVTQQGSYHCNWTGVGCDSKGLVESLDLSNMNLSGRVWDHIQFLSSLSSFNISCNNFASSLPKSLSNLTSLKSFDVSQNYFTGSFPTGLGRAAGLISINASSNDFSGFLPEDIGNATLLESLDFRGGYFISSIPRSFKNLQKLKFLGLSGNNFTGRIPGYLGELTSLETLIMGYNEFEGEIPSEFGNLTSLQYLDLAVGGLSGKIPPELGKVKKLTVIYLYHNKFAGKIPPQFGNITSLVYLDLSDNQISGEIPQEFTKLENLQLLNLMSNKLTGPVPEKLGELKNLQVLELWKNSLQGPLPLNLGQNSPLQWLDVSSNSLSGEIPPGLCTKGNLTKLILFNNSFTGSIPSGLANCSSLVRARIQNNLISGTIPVGFGNLLGLQRLELAKNNFTGQIPTDITSSTSLSFIDVSWNHLESSLPSDILSIPTLQTFIASHNNFGGNIPDEFQNCPSLSVLDLSNTHISGTIPESIASCQKLVNLNLRNNELTGGIPKSITNMPTLSVLDLSNNSLTGRIPENLGSSPALEMLNLSYNKLEGPVPSNGMLVTINPNDLIGNAGLCGGILPPCSASLAVTRQRRSSHIRHIIIGFLTGISVIFSLGAVYFGGRWVYKRWYLYNNFIHDWFKQSNEDWPWRLVAFQRISFTSSDILTCIKESNVIGMGGTGIVYKAEIHRPHITVAVKKLWRSRTDIENGNDVLREVELLGRLRHRNIVRLLGYVHNERDVMMVYEYMPNGNLGTALHGEQSARLLVDWVSRYNIALGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEPRVADFGLARMMIQKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELVTGKMPLDPAFEESIDIVEWIRKKKNNKALLEALDPTIATQCKHVQEEMLLVLRIALLCTTKLPKERPSMRDIITMLGEAKPRRKSVCHNGEQDSSSMEKPTIFTSSPVVSLL* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1541 1012 Gene3D Phosphorylase Kinase; domain 1 701 784 - -
Apr8g1541 1012 SUPERFAMILY Protein kinase-like (PK-like) 703 975 IPR011009 -
Apr8g1541 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Apr8g1541 1012 PANTHER UNNAMED PRODUCT 7 993 - -
Apr8g1541 1012 PRINTS Leucine-rich repeat signature 287 300 - -
Apr8g1541 1012 PRINTS Leucine-rich repeat signature 548 561 - -
Apr8g1541 1012 SMART LRR_typ_2 212 235 IPR003591 -
Apr8g1541 1012 SMART LRR_typ_2 428 452 IPR003591 -
Apr8g1541 1012 SMART LRR_typ_2 92 116 IPR003591 -
Apr8g1541 1012 SMART LRR_typ_2 548 572 IPR003591 -
Apr8g1541 1012 SMART LRR_typ_2 284 307 IPR003591 -
Apr8g1541 1012 SMART LRR_typ_2 332 356 IPR003591 -
Apr8g1541 1012 Pfam Leucine rich repeat N-terminal domain 20 66 IPR013210 -
Apr8g1541 1012 Gene3D Ribonuclease Inhibitor 143 250 IPR032675 -
Apr8g1541 1012 Pfam Leucine rich repeat 262 321 IPR001611 GO:0005515
Apr8g1541 1012 Pfam Leucine rich repeat 526 585 IPR001611 GO:0005515
Apr8g1541 1012 MobiDBLite consensus disorder prediction 984 1012 - -
Apr8g1541 1012 ProSiteProfiles Protein kinase domain profile. 702 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1541 1012 Gene3D Ribonuclease Inhibitor 22 141 IPR032675 -
Apr8g1541 1012 Pfam Protein kinase domain 704 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1541 1012 Gene3D Transferase(Phosphotransferase) domain 1 785 1001 - -
Apr8g1541 1012 ProSitePatterns Protein kinases ATP-binding region signature. 708 732 IPR017441 GO:0005524
Apr8g1541 1012 SUPERFAMILY L domain-like 56 303 - -
Apr8g1541 1012 Gene3D Ribonuclease Inhibitor 355 621 IPR032675 -
Apr8g1541 1012 SUPERFAMILY RNI-like 229 582 - -
Apr8g1541 1012 SMART serkin_6 702 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1541 1012 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXL1 7 993 - -
Apr8g1541 1012 Gene3D Ribonuclease Inhibitor 251 354 IPR032675 -
Apr8g1541 1012 MobiDBLite consensus disorder prediction 990 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1541 Apr-Chr8 24950607 24954196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1541 4 1012 Receptor kinase-like Gene Family AT1G08590 64.279 0.0 1303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr8g1541 Pkinase 3.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1541 - - gmx:100793873 1802.33