Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1531 ATGTGCAACCGTATCTGTCTTTTGCTGGTGATTTGTTTCTTTGTTTTGTTGAACGCCCTTCTTGCAACGAGTGACAAGGGTAGTGATTCCTTGATCTTGGGGTGCGGGTTGGGTGAAGGTGGTGGCAAAGATGCTGATGGAAGGCAATGGATCCCTGATAACAAGTACCTCTCAGAAGGCAATTCCATCACATCCAAAGCCTCTTTCCAAGACCCTTCACTTTTGTCTGAGGTTCCATACATGACATCTCGAGTTTTCACATCCGAAGCAATCTACAAGTTCCCTGTTAAACCTGACAAGCGTTATTGGCTAAGGCTTCATTTCTACCCCAATATTTATGGCACCTATGACACATTCAATTCATATTTCTCCGTGACAGCACATGGGGTAATTCTTCTTTCTAATTTCAGTGCCTCAATCACATGCCAAGCCCTCTCACAAGCCTACCTTGATAGAGAGTATTCCCTTGCGCCTTTGAATTCAGACACCCTAACCGTTACCTTTAAGCCTTCTGATAAACACAATGGGGCTTTTGCTTTTGTCAATGGGATTCAGCTGATTGAAATGCCTGAGTTGTTTGACTCAGCTTCGTTGGTGGGTTATAATGAGCAAACCGTTGATGCCAAAAGTTTGCATTTTCAGACAATGTTTAGATTAAACGTTGGTGGGCAATATATATCCCCTGTTGATGATTCTGGTCTAAGCAGGATGTGGTATGATGATACACCTTATCTATATGGTGCTGCCACTGGTGTCACCAATCAAGCTGCCAAGGATGTAAAAATTAACTACCAGAGCATGCCACAACACATTGCTCCACCGAATGTGTATTCCACATCACGGTCCATGGGCAACGATAAGGATATCAACATGGGCTACAATCTCACATGGATTTTCCAAGTTGATCCAAATTCCATGTACCTTACCAGGTTGCATTTCTGTGACTACTACTATTCTAAAGTGAACGAGATTGTTTTCAATATCTTCATCAACAACCAAACGGCACAGGCTGAAGCAGATGTGATTGGGTGGAGTGGAGGTAAAGGAGTTCCAACCTACAAAGATTATGTAGTATATGTCCAAGATGGGACAGGTGATGATCAGCTTTGGCTTGCTTTGCACCCGGCACCTGATACAAAGCCAGAATACTATGATGCAATACTCAATGGTGTAGAGGTTTTCAAGATCAATGATACAAACCTGTCTGGTCCTAATCCTCAACCATCCGAGATGCTATTGGAACATGAGCATAAAGCAAGGACTTTCCAAAACAACAAACGTAACAGTAAGACTTTTGTCATTGGTAGTGCTGCTGGTGGCGCTGCTGGTTTTGCCTTAGTGGCAGCATTATGTGTTGTTGTTCGCCACCAAAAAAAGAAGAGAACTCCTGGATCATACACTAGCACATCAAGCTGGTTGCCAATTTATGGGACTTCGCACACAACAGGTACCAAATCTTCAAGGTCAGGGAAGAGTACTGTTGGTAGTGGCAACGTATCAGCCATGGCTCAAGGACTGTGTCGCTATTTCTCCTTACAAGAGATGAAGCAAGCGACTAAGAATTTTGATGAGTCCAACGTTATTGGGGTAGGAGGGTTCGGAAAGGTTTATAAGGGTGTTATAGACAATGGGTTCAAAGTGGCAATAAAAAGATCGAACCCACAATCAGAACAAGGAGTCAACGAGTTCCAGACTGAGATTGAGATGCTTTCCAAACTGAGACATAAGCATTTGGTGTCCTTGATTGGTTTTTGTGAGGAAGATGATGAGATGTGTCTAGTTTATGACTACATGGCTCGTGGCACCCTAAGAGAACATCTTTACAAGGGCAACAAGACATTGAACACTCTATCATGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAGAGGCCTTCATTACCTTCACACGGGGGCAAAGTATACGATAATTCATAGAGATGTCAAGACAACTAACATTCTCCTTGATGAAAATTGGATTGCCAAGGTTTCAGATTTTGGATTGTCAAAAACGGGTCCAAACATGAACAATGGTCATGTTAGTACTGTGGTGAAGGGTAGCTTTGGATACCTGGATCCTGAATATTTCAGGAGGCAACAGTTGACTGAGAAATCTGATGTGTACTCGTTTGGGGTTGTCCTGTTTGAGGTCCTTTGTGCAAGGCCTGCTTTGAATCCTAGCCTTCCAAAAGAACAAGTTAGCCTTGCAGATTGGGCTTTGCTCAACAAAAGAAAAGGAACACTAGATGATATTATTGACCCCAATCTCAAAGGAAACATCAACCCTGAAAGCTTGAAGAAGTTTGTAGATGCAGCTGAGAAGTGTTTGTCTGATCAAGGACTTGATCGCCCCTCCATGAATGATCTATTGTGGAATCTTGAATTTGCTCTCAACCTACTTGGTAACACTGATGGTTTAGTTCGTTCTTCACATCTTGATGAAGCCGAGTTTGAAGAAGTAAGCTTGGAAAATAATGACATGGCAGCTCATTATAAAAATCTAAGCCTTGGAAGTGATCATGAGCTTAGGCAGGAGTCCAGTGAGAAATCTTCTGCCATCTTCTCTCAAATTGTTAACCCAAGCGGGCGATAA 2595 0.4277 MCNRICLLLVICFFVLLNALLATSDKGSDSLILGCGLGEGGGKDADGRQWIPDNKYLSEGNSITSKASFQDPSLLSEVPYMTSRVFTSEAIYKFPVKPDKRYWLRLHFYPNIYGTYDTFNSYFSVTAHGVILLSNFSASITCQALSQAYLDREYSLAPLNSDTLTVTFKPSDKHNGAFAFVNGIQLIEMPELFDSASLVGYNEQTVDAKSLHFQTMFRLNVGGQYISPVDDSGLSRMWYDDTPYLYGAATGVTNQAAKDVKINYQSMPQHIAPPNVYSTSRSMGNDKDINMGYNLTWIFQVDPNSMYLTRLHFCDYYYSKVNEIVFNIFINNQTAQAEADVIGWSGGKGVPTYKDYVVYVQDGTGDDQLWLALHPAPDTKPEYYDAILNGVEVFKINDTNLSGPNPQPSEMLLEHEHKARTFQNNKRNSKTFVIGSAAGGAAGFALVAALCVVVRHQKKKRTPGSYTSTSSWLPIYGTSHTTGTKSSRSGKSTVGSGNVSAMAQGLCRYFSLQEMKQATKNFDESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDDEMCLVYDYMARGTLREHLYKGNKTLNTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWIAKVSDFGLSKTGPNMNNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLPKEQVSLADWALLNKRKGTLDDIIDPNLKGNINPESLKKFVDAAEKCLSDQGLDRPSMNDLLWNLEFALNLLGNTDGLVRSSHLDEAEFEEVSLENNDMAAHYKNLSLGSDHELRQESSEKSSAIFSQIVNPSGR* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1531 864 SMART serkin_6 522 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1531 864 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 23 850 - -
Apr8g1531 864 Pfam Malectin-like domain 34 396 IPR024788 -
Apr8g1531 864 ProSiteProfiles Protein kinase domain profile. 522 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1531 864 Gene3D Phosphorylase Kinase; domain 1 482 597 - -
Apr8g1531 864 MobiDBLite consensus disorder prediction 844 864 - -
Apr8g1531 864 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Apr8g1531 864 SUPERFAMILY Protein kinase-like (PK-like) 499 797 IPR011009 -
Apr8g1531 864 MobiDBLite consensus disorder prediction 849 864 - -
Apr8g1531 864 CDD STKc_IRAK 528 795 - -
Apr8g1531 864 Gene3D Transferase(Phosphotransferase) domain 1 598 803 - -
Apr8g1531 864 PANTHER OS07G0166700 PROTEIN 23 850 IPR045272 GO:0004714|GO:0006468
Apr8g1531 864 Pfam Protein tyrosine and serine/threonine kinase 526 789 IPR001245 GO:0004672|GO:0006468
Apr8g1531 864 Gene3D - 34 190 - -
Apr8g1531 864 Gene3D - 211 397 - -
Apr8g1531 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1531 Apr-Chr8 24754530 24757124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1531 28 864 Receptor kinase-like Gene Family AT3G51550 53.143 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr8g1531 Malectin_like 1.2e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1531 - - gmx:100791236 1397.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0827 4 6653345 6655939 Apr8g1531 8 24754530 24757124 PCT