Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g1528 | ATGGTGTCGGGACAAGTCGTGAAGGTGAAGAGAAATACGCTACGAGCATGCATGACATGCCCTCTTTGCAATAACCTCTTCAAAGATGCTACCACCATCTCTCTCTGCCTTCATACCTTTTGCAGGAAGTGCATATATGAGAAACTCTCGGATGAGGAGATGGATAGCTGCCCAGTGTGCAATATTGATCTTGGCTGCCTTCCGGTGGAAAAACTCAGGCCAGACCATAATTTGCAAGATATAAGGGCAAAAATATTCCCTTTTAAAAGAAAAAAGATCAAGGCCCAAGAAGTTTTGTCTTCAATATCCTTGCCTGCAAAAAGGAAAGAAAGATCACTTTCATCATTGGTTGTAAGTGCTCCCAAGGTTTCAATGCAACCTGGCTTTACAGGAAAGAGAACAAAAACCAGTACAAGAAAGGCTGCTGCTTTACGTGGATGCAGCTTTCTACTTGAAGAATCCATAAAGAAGGAAGAAACAAATGGTGAAGATAATACGGATTCTTCCGTGGCTGAGCCTTCTAAGAAGCATAAGCCCAATGAAGATGCAGAGAACAGTGTGGAACATACAGAAGGGAAGGTTGATCTCTGGACACCACTAAACTGTCTTGTTGAAGCTGCCAACAGAACAAAGTCCTCCAGGTCAAATTCACAAGCAACTCCTCTGGCCAAATTAGAGTCTCCAATTACTCCTCACGGTGGACAAGATACGCCTGAAATTACAACCAGAACAGACCTACCTGCTTCTGTCCAGAGTGAATTAAACATTCCTAAAAACAAAAATAAAGATACTGGACATAAAACAATATTTGGAGATGACAAGGATGGAAACAGCTTGCCATCAGGACCGGTGAAGAGAAGAAGGTTGCGTCCTGCTGGTCAGAAAAGAGTTGCAGCATCTGAGATGTCTGGCTCATCTCCTGTCCTGCTAGATGCAACAGGAGGAAAGAGCAACAGAAAAAACAGTCCCATTTGGTTTTCATTAGTTGCTTCAGAGGACCAGAAAGGAGATGTTCCCTTGCCACAAATCTCAGCATGTTACTTAAGAATAAAGGATGGTACCGTGCCTGTCTCATTTATTCAGAAGTACCTAGTGAAGAAACTTAATCTTGCCAGCGAAGCAGAAGTGGAAATAATGTGCCGGGGTCAGCCAGTGCTCCCATCTCTGCAACTGCATAACTTAGTAGATCTATGGTTCCGGACAGCATCAACCTCAAAAAAGATACCAGCGTCTGTGGGGTCCTCAGCCAAGGATTTTGTGATGGTTTTGTCCTATTGTCGAAAGGCCTTGCCTTCTTGA | 1299 | 0.4365 | MVSGQVVKVKRNTLRACMTCPLCNNLFKDATTISLCLHTFCRKCIYEKLSDEEMDSCPVCNIDLGCLPVEKLRPDHNLQDIRAKIFPFKRKKIKAQEVLSSISLPAKRKERSLSSLVVSAPKVSMQPGFTGKRTKTSTRKAAALRGCSFLLEESIKKEETNGEDNTDSSVAEPSKKHKPNEDAENSVEHTEGKVDLWTPLNCLVEAANRTKSSRSNSQATPLAKLESPITPHGGQDTPEITTRTDLPASVQSELNIPKNKNKDTGHKTIFGDDKDGNSLPSGPVKRRRLRPAGQKRVAASEMSGSSPVLLDATGGKSNRKNSPIWFSLVASEDQKGDVPLPQISACYLRIKDGTVPVSFIQKYLVKKLNLASEAEVEIMCRGQPVLPSLQLHNLVDLWFRTASTSKKIPASVGSSAKDFVMVLSYCRKALPS* | 433 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g1528 | 432 | MobiDBLite | consensus disorder prediction | 234 | 258 | - | - | |
Apr8g1528 | 432 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 4 | 429 | IPR044807 | GO:0004842 | |
Apr8g1528 | 432 | PANTHER | UBIQUITIN PROTEIN LIGASE DRIP2, PUTATIVE-RELATED | 4 | 429 | - | - | |
Apr8g1528 | 432 | SUPERFAMILY | RING/U-box | 14 | 85 | - | - | |
Apr8g1528 | 432 | MobiDBLite | consensus disorder prediction | 155 | 193 | - | - | |
Apr8g1528 | 432 | MobiDBLite | consensus disorder prediction | 259 | 273 | - | - | |
Apr8g1528 | 432 | Pfam | Zinc finger, C3HC4 type (RING finger) | 20 | 60 | - | - | |
Apr8g1528 | 432 | SMART | ring_2 | 20 | 60 | IPR001841 | - | |
Apr8g1528 | 432 | MobiDBLite | consensus disorder prediction | 155 | 191 | - | - | |
Apr8g1528 | 432 | ProSiteProfiles | Zinc finger RING-type profile. | 20 | 61 | IPR001841 | - | |
Apr8g1528 | 432 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 4 | 110 | IPR013083 | - | |
Apr8g1528 | 432 | MobiDBLite | consensus disorder prediction | 208 | 224 | - | - | |
Apr8g1528 | 432 | Gene3D | - | 310 | 408 | - | - | |
Apr8g1528 | 432 | MobiDBLite | consensus disorder prediction | 208 | 315 | - | - | |
Apr8g1528 | 432 | ProSitePatterns | Zinc finger RING-type signature. | 36 | 45 | IPR017907 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g1528 | Apr-Chr8 | 24734030 | 24739324 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g1528 | 1 | 351 | C3H Transcription Factor Family | AT2G30580 | 44.624 | 1.34e-88 | 271 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g1528 | K16277 | - | gmx:100783999 | 794.653 |