Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1521 ATGGATAGGGTCTTCTCAGTCGACGAAATCTCCGATCACTTCTGGTCGCCGCCGATCCCTGTCTCCGGCGCCGATGATTCCTCTAAGATGAGTCGCAGCGCTTCTGAGTGGGCCTTTCAGCGCTTCCTCCAGGAAGCTTCAGCTTCCGCACCCTCTCCCCCTTCTTCCTCCTCCGCCGCCGACGACGTCGTTTTCGTCGAGATCAACGATCAAGCTAAACCCCCTCCCAAAAACGGCGCCGTTTTGCCCAATGCCCCTGCACCCGTTCCCCTTGACTCTGAGGAATACCAAGCTTTCCTCAAAAACCAACTCAATCTTGCATGCGCCGCCGTCGCCCTGACTAGGCAGGGGTCTTTGACTAAATCTCAAGATCCAACCACATTTCCTGAGGGTGGATCACAGCCGTCTAATGCTTCTCAAGTTGGATCTCAGCCTACTTCTAAAGCATCTGTTCCTTCTGGAAATGATCCATCCAAGTTACAAGATAAAGATACCAAAGTACCAGTTGGGATTCCTTCCTTACCTACCTTGCAAAAGAAACCTGCTGTTGCAATCAGGCCATCAACTAGTGGATCATCGAGAGAGCAGTCAGATGATGAGGATGCTGAGGGAGAGACATCTATGAATGACAACTTGGACCCTGCTGATGCAAAACGAGTAAGGAGGATGCTTTCCAATAGGGAGTCAGCAAGACGCTCAAGAAGACGAAAGCAAGCTCATTTAACTGAGCTGGAAACACAGGTTTCTCAACTAAGAGGTGAAAATTCTTCCTTGTTAAAGCGCCTTACTGATGTAAGCCAGAAATACAATGACTCTGCTGTCGACAACAGAGTTTTAAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACTGTCAAAAGAATTACTGGGTTGAACCCTATGTTTCATGCCATGTCTGATATATCAACAATGGGTATGCCATCATTTGATGGAAGCCCTTCAGACACCTCAGCTGATGCAGCTGTTCCTGTGCAAGATGATCCCAGTCATCACTTCTATCAACCAACATCTAACAATCCTATTCCCAGTCATGATCTGAGAGTGGGGGACATTTCTTCAATTGAAAATGTGCAGCAGAATGCCGCAGCAGCGGTAGCTGGGAACAATATCGGTCAAACAGCTTCCCTGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGTGGATTCGTGTGGACCTCCATCTAATGGGGAGCAGTAA 1251 0.4852 MDRVFSVDEISDHFWSPPIPVSGADDSSKMSRSASEWAFQRFLQEASASAPSPPSSSSAADDVVFVEINDQAKPPPKNGAVLPNAPAPVPLDSEEYQAFLKNQLNLACAAVALTRQGSLTKSQDPTTFPEGGSQPSNASQVGSQPTSKASVPSGNDPSKLQDKDTKVPVGIPSLPTLQKKPAVAIRPSTSGSSREQSDDEDAEGETSMNDNLDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLLKRLTDVSQKYNDSAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFHAMSDISTMGMPSFDGSPSDTSADAAVPVQDDPSHHFYQPTSNNPIPSHDLRVGDISSIENVQQNAAAAVAGNNIGQTASLQRVASLEHLQKRIRGGVDSCGPPSNGEQ* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1521 416 PANTHER BZIP TRANSCRIPTION FACTOR 1 397 - -
Apr8g1521 416 MobiDBLite consensus disorder prediction 45 59 - -
Apr8g1521 416 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 221 236 IPR004827 GO:0003700|GO:0006355
Apr8g1521 416 MobiDBLite consensus disorder prediction 212 227 - -
Apr8g1521 416 MobiDBLite consensus disorder prediction 119 241 - -
Apr8g1521 416 SUPERFAMILY Leucine zipper domain 218 268 IPR046347 GO:0003700|GO:0006355
Apr8g1521 416 PANTHER BASIC LEUCINE ZIPPER 63 1 397 - -
Apr8g1521 416 MobiDBLite consensus disorder prediction 45 90 - -
Apr8g1521 416 Coils Coil 276 296 - -
Apr8g1521 416 Gene3D - 217 272 - -
Apr8g1521 416 Pfam bZIP transcription factor 217 268 IPR004827 GO:0003700|GO:0006355
Apr8g1521 416 SMART brlzneu 214 278 IPR004827 GO:0003700|GO:0006355
Apr8g1521 416 MobiDBLite consensus disorder prediction 119 158 - -
Apr8g1521 416 Pfam Basic leucine-zipper C terminal 285 405 IPR020983 -
Apr8g1521 416 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 216 270 IPR004827 GO:0003700|GO:0006355
Apr8g1521 416 CDD bZIP_plant_GBF1 219 270 IPR045314 GO:0003700|GO:0006355
Apr8g1521 416 Coils Coil 227 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1521 Apr-Chr8 24587917 24592412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1521 1 307 bZIP Transcription Factor Family AT4G02640 43.373 1.90e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr8g1521 bZIP_C 3.9e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1521 K25784 - gmx:100170702 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1521 8 24587917 24592412 Apr8g1521 8 24587917 24592412 ECH
Apr4g0817 4 6592532 6597606 Apr8g1521 8 24587917 24592412 PCT