Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1512 ATGGCGGATTCTTCAAAGGACCAGAAAGCGCGCGTTTACCATCCCTACCAAGACCTCGACGTTCCCATCCAGAAGCTCTACAATCTCCCCACCTCACCGGAGCTCCTCTTCCACGAAGAAGCTACCAGGACTCATCGTTCCTGGGGCGACAACCTCCAGTACTACACCGGCTCCGGCTACCTCTCCGGCGCCATAATCGGTGCCGCTAAGGGCACCGTTCAAGGCCTCAGGGATGCGGAGTCCGGCGACTCGCTCAAGCTCCGACTGAACCGAGTCCTGAACTCGGGGGGTCAGGCGGGTCGAAGAGTGGGGAACTCGCTGGGCGTGTTGGGCCTGATTTTCGCGGGCCTGGAGAGCGGGATGATCCACTTCAGGGGCAGGGATGACTTGGTCAACAGCGCCGTCGCCGGACTGGGCACCGGAGCGCTCTACCGAGCCGCCGCGGGGCCCCGATCGGCTGCTATTGCCGGTGCCATCGGCGGAATCGCGGCGGCCGCGGCTGTTGCCGGAAAGCAAGCTTTGAAAAGATATGTGCCCATATAA 543 0.6225 MADSSKDQKARVYHPYQDLDVPIQKLYNLPTSPELLFHEEATRTHRSWGDNLQYYTGSGYLSGAIIGAAKGTVQGLRDAESGDSLKLRLNRVLNSGGQAGRRVGNSLGVLGLIFAGLESGMIHFRGRDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVAGKQALKRYVPI* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1512 180 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 5 180 - -
Apr8g1512 180 Pfam Tim17/Tim22/Tim23/Pmp24 family 54 162 - -
Apr8g1512 180 PANTHER TIM23 5 180 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1512 Apr-Chr8 24446272 24447427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1512 2 176 Chloroplast and Mitochondria Gene Families AT1G17530 57.627 1.41e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1512 K17794 - gmx:100803835 271.166