Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1505 ATGAATGGGGTCACACACCTTGAAACAGATGACACTGAGTTTGTTGAAGTTGATCCCACTGGCAGATACGGCAGATACAATGAAATCCTTGGTAAAGGAGCTTCAAAGACAGTATATAGAGCATTCGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAGCTGTATGATTTTCTGCAAAGCCCTGAAGATCTCGAGAGGCTTTACTGTGAAATTCATCTCCTGAAAACTTTGAAGCACAGAAACATTATGAAATTTTACACCTCCTGGGTCGATACTGCAAATAGGAATATCAACTTTGTGACTGAAATGTTCACCTCCGGTACACTTAGACAGTATAGGCTGAAGCACAAGAGAGTTAACATCAGAGCAGTGAAGCATTGGTGTAGACAGATCTTGAGTGGGCTTCTCTATCTTCATAGTCATGACCCGCCTGTGATCCATAGAGATCTAAAATGTGATAATATTTTTGTCAATGGAAACCAGGGGGAAGTAAAGATTGGGGATCTTGGATTGGCTGCAATTCTCCGTAAATCCCAGGCTGCTCATTCTTCATCTGGTTCTGTCGTTACAGGAACGCCTGAGTTCATGGCTCCAGAAGTATATGAAGAGGCATATAATGAATTAGTTGACATATATTCCTTTGGGATGTGCATATTAGAGATGGTCACGTTTGAATATCCTTATAGTGAATGTACTCATCCAGCTCAAATCTACAAGAAAGTTGTTTCCGGGAAAAAGCCAGATGCTTTGTATAAAGTAAAGGATCCAGAAGTGCGACAATTTGTTGAGAAGTGCTTGGCTACAGTATCTCTTAGGCTTTCTGCAAGGGAGCTTCTAGATGACCCATTTCTTCGAATTGATGATTATGAATATGATTTTAGACCTGTGGACAATGGGGAATTGGATGACTTTGATGTTGACATAAGCATCAAGGGCAAGAGGAAAGATGATGGTGGCATCTTTTTGAGACTAAGAATTGCAGATAAAGAAGGTCGTATCCGAAATATTTATTTCCCATTTGACATAGAGATGGACACGGCAATAAGTGTGGCAACTGAAATGGTTGCAGAACTCGACATTACTGATCAGGATGTTACCAGAATAGCAGATATGATAGATGGAGAAATTGCTTCCTTGGTACCTGAATGGAGACAAGGACCAGGAATCGATGAGACTCCCCGTTTTGCAAATCAAGGTTTCTGTCACAATTGTGTGTCTAATCATACTTCCAGCGGATCTCTTCTGGATTTTCTATCACATAATCCAGGTAACAAGAACATGCAACTTCTCGAGTGTTGTAAGCATGGATGTGCTTCAATGCATGGGCGGTTTGGGGAGATTACTTTCCAATCTGATGAATATGACAATCATGTTAGAGGGGATCTAAACATATCAAGCCAATCAGACTGCCGGGAGTATCAGGCAATATGGAATCAGCATGAAAGTCGTGAACTGAGTCCTGTAGAGTCCGATCAAAGCCATTCTGATGAACAATATGAACAATTGGATAAATCAATATCTGCTGAAGATCAAGGACAGAATGTTTGGGAAAACAAGTTTGCTCCCAATGCAGCAAATTCCCTTCGAAATTTATCAGGAACGCATGATTTCTCCACTATTCGGTCATTATATTGTGACCTTGAGGATGACTATGAGAAAGAGATCCAAAAGGAACTTAGATGGCTCAGAGCCAAGTACCAAATGGAGTTAAGGGAACTTAAGGATCAACAGTTTGGGCTTAGGGCTAAATCTTCACATTGTAACACAGAGCACAAAACAGAAAATGGCATTTTGTCACCTTCACTGACAGAAACATTAAAAGGAGGCAACAATGGGATTCAGTTGAAACCCATCACTAATAACTGGAACTGTGATTCCAATAGTCATCCTCATGTCCATAAAAGCAGCCCCAATTCTGACACCCAAAGGGCCCAAAATTGCGAGGCGATGGAATCCCCTGTAGAAGGTATGGTTACTGCAAAGAGTTTTTACACAGGCTCCTTGCTTCCACACTCTCTGCACAGGACAGTTTCCCTCCCAGTTGATGCTGTTGATATATAA 2070 0.4126 MNGVTHLETDDTEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILSGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSQAAHSSSGSVVTGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDALYKVKDPEVRQFVEKCLATVSLRLSARELLDDPFLRIDDYEYDFRPVDNGELDDFDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIEMDTAISVATEMVAELDITDQDVTRIADMIDGEIASLVPEWRQGPGIDETPRFANQGFCHNCVSNHTSSGSLLDFLSHNPGNKNMQLLECCKHGCASMHGRFGEITFQSDEYDNHVRGDLNISSQSDCREYQAIWNQHESRELSPVESDQSHSDEQYEQLDKSISAEDQGQNVWENKFAPNAANSLRNLSGTHDFSTIRSLYCDLEDDYEKEIQKELRWLRAKYQMELRELKDQQFGLRAKSSHCNTEHKTENGILSPSLTETLKGGNNGIQLKPITNNWNCDSNSHPHVHKSSPNSDTQRAQNCEAMESPVEGMVTAKSFYTGSLLPHSLHRTVSLPVDAVDI* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1505 689 Pfam Protein kinase domain 27 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1505 689 SUPERFAMILY Protein kinase-like (PK-like) 27 288 IPR011009 -
Apr8g1505 689 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Apr8g1505 689 Coils Coil 559 579 - -
Apr8g1505 689 ProSiteProfiles Protein kinase domain profile. 24 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1505 689 Gene3D Transferase(Phosphotransferase) domain 1 107 292 - -
Apr8g1505 689 MobiDBLite consensus disorder prediction 627 648 - -
Apr8g1505 689 CDD STKc_WNK 22 287 - -
Apr8g1505 689 MobiDBLite consensus disorder prediction 486 507 - -
Apr8g1505 689 MobiDBLite consensus disorder prediction 487 507 - -
Apr8g1505 689 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 305 678 - -
Apr8g1505 689 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 298 - -
Apr8g1505 689 SMART serkin_6 24 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1505 689 Gene3D - 321 388 - -
Apr8g1505 689 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 298 - -
Apr8g1505 689 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 305 678 - -
Apr8g1505 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Apr8g1505 689 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 324 378 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1505 Apr-Chr8 24314415 24318705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1505 1 486 MAP Kinase Kinase Kinase AT3G22420 56.396 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Apr8g1505 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1505 K08867 - gmx:100775959 1232.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1505 8 24314415 24318705 Apr8g1505 8 24314415 24318705 ECH
Apr4g0798 4 6483829 6487347 Apr8g1505 8 24314415 24318705 PCT