Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1502 ATGCACAACTGCCATAAACGAATAAGCGGTTACCTTGATACTCTAATATGCGGAAAAAGGAAGTGTAGTGTCTCCTCAACAATGCTTTTGCCGCTGGTTTCTTGGATGTTTTCGCCCTCTTCACCCTCATCATCCTCTTCAGAAGAAGAAAAAGAAGAAGAAAGCCTTGACATTAACACTGACCAAAACGACAATGTGGAAGATGAAGAAAACGACCTTTTTCTCAGTTCATCCGATGTCGACGACACCATTCCCATTGCCCTCGCTGTTCCCAATGCCTCCCCCGCCGTGACGGTGGCCTTCCCCGCAGACGATGAAAGGAACACCGTTGCCACCACCGCCACTGCCACCATTATAATAACACGCTCAAAAGGACAGCAAACAGCCAATTATTCTGGCATGGTGAGACAATATCAGAGGCTATGGACCAAGCAGGACGAGATGGAATTGTTGAAGGGATATCTTGATTACACCAAGCAGCACCGAAGGGCCACTGCAACTCTCCAAAACGATGTAGCTATGTTGTATGATCATGTGAGGCCCAAACTGAACGTGGAATTCAACAAGAACCAGCTTGTTGAGAAGCTGCGTAGGTTAAAGAGAAAACACAAGTTGGCTTTGGACAAAGGCAAGGAGAAAGAGGTTCTTTTTAAGAACCCCCAGGAGCTGGCCATTTTTGAAATCTCCCACAAGATTTGGGGCAATGACAAAGACATAATAGGACAAGATGCCTTGGATGATGATGAATCAGGACGCACTCCTGATTGTCATGATCTTGTCGGCAATGTTAAGGTGAAGATTGAACATCCTGACAACAGTGATGAAATCGACAATAGAGCGCCAAAGCGGCCACGGCTAATCATTGATGATTTGAACGGAACAAATGAGCAGAACAATGGTGATGGTGATACAAGCATACACAGCTTCATTGAGGAGACCATGAGGTCCTGTTTCTCGCCATTGATTCAGGAACTGTTGGATGAAGCACAGGAAGAGCAGTTTGGTGGGTTGCCGCTGATCCCATTGCCGATATACCCTGGAGAAGTGGGCGATGAGCGATGGCAAAAACGGAGGATTTTAGAGCTGGAGGTGTATTTGAAGAGGTTGGAATTGTTGCGGGATCAGATCAAAACTAAATTGGAAGAGTTGCGGTCTAGCTGA 1161 0.4625 MHNCHKRISGYLDTLICGKRKCSVSSTMLLPLVSWMFSPSSPSSSSSEEEKEEESLDINTDQNDNVEDEENDLFLSSSDVDDTIPIALAVPNASPAVTVAFPADDERNTVATTATATIIITRSKGQQTANYSGMVRQYQRLWTKQDEMELLKGYLDYTKQHRRATATLQNDVAMLYDHVRPKLNVEFNKNQLVEKLRRLKRKHKLALDKGKEKEVLFKNPQELAIFEISHKIWGNDKDIIGQDALDDDESGRTPDCHDLVGNVKVKIEHPDNSDEIDNRAPKRPRLIIDDLNGTNEQNNGDGDTSIHSFIEETMRSCFSPLIQELLDEAQEEQFGGLPLIPLPIYPGEVGDERWQKRRILELEVYLKRLELLRDQIKTKLEELRSS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1502 386 MobiDBLite consensus disorder prediction 50 65 - -
Apr8g1502 386 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 28 386 - -
Apr8g1502 386 MobiDBLite consensus disorder prediction 38 65 - -
Apr8g1502 386 PANTHER BNAANNG10740D PROTEIN-RELATED 28 386 IPR007592 GO:0006355
Apr8g1502 386 Coils Coil 182 209 - -
Apr8g1502 386 Pfam Protein of unknown function, DUF573 139 234 IPR007592 GO:0006355
Apr8g1502 386 Coils Coil 362 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1502 Apr-Chr8 24165503 24166663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1502 84 385 GeBP Transcription Factor Family AT5G28040 32.967 9.77e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Apr8g1502 DUF573 1.2e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1502 - - gmx:102662842 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0794 4 6459068 6460725 Apr8g1502 8 24165503 24166663 PCT