Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1501 ATGGCATCCCACCAAAACGACGCCGTTTTCCCCGAGGAAGATCTCGACGACGACGACGAAACGCTGGAGGACGAAGAAGAGGAAGACGAAGACGACGACGTTTTGTGCGAACCTGACGAAGACGATGAAACCGAACCCTCCCCCTCCACCTCCTCTGCCCTCGCCGTCGTCGCCCTCGCCGCGCCCGGTTCCGCCGTATCCGAAGCCGACAACGTGACAATTCCGACGGCGACAATCGCCGTCGCCGATTCCTCGCCTAAACGACAGCGCACCGAGCAGATCGAAGAGAAAAAAGCGTTGGACGATTCTCGAAGACTGTTTCAGCGTCTATGGACCGACGAGGACGAGATCGGCCTCTTGCAAGGGTTTCTCGAATACACCGCACAGCGAGGATCCTCTCACCACAACGACACCGCTTTGTTCTACGACCAAATCAAGTCAAAGCTTCAACTCGGTTTCAACAAGAATCAGCTCGTCGAGAAGCTCCGAAGGTTGAAGAAGAAATACCGCAACGTTCTCACCAAAATCACGTCCGGCAAGGATTTTTCTTTCAAAAGCCCTCACGATCAAGCCACCTTCGAAATCTCGTGCAGGATCTGGAGCAACACCGGTCCAATAACCGGTCCTGTCGAAGATGACGACGAAATCAACCTCAACCCTAATCCTAACCCTAATTTCAGCCACTCAATGAAGAGTGAATCGATGAACGAGAAGAGGACCGCGTCGTCGCGGAAGCGGTCGCGATCTCGATCGGAGAAGCGTGATATGAACGATGGTTCAGCGTTGCATAAAGATAATAATTGTAATAGCAATAATAATAATAATAACAACAACAATAAAGATAATGAAAATTGTAATGGTAGGCATACCTTACAGGGTTTGATTGAAGAGACTGTGAGGGGTTGTTTGTCTCCGGTGTTGAAGGAGTTGTTGGTAAGTGGTGGCATGGGATTTAGAAACCCTTTTGGTTTTGGGGGAAGAGGAGGCTTCGCGTTGAATCCAATGCCAATGCCAATGCCAATGCCGTTGAGTCTTTTGAATTTGGGAATTGGGGAAATAGGGGGTGATGATAACTGGAGAAAGCAACAGATTTTGGAGTTGGAAGTGTATTCCAAGCGTTTGGAATTGGTGCAGCATGAGATCAAGGTTGCTCTCGAGGAGTTGCGATCTGCTGGAGGAGGATGA 1185 0.4987 MASHQNDAVFPEEDLDDDDETLEDEEEEDEDDDVLCEPDEDDETEPSPSTSSALAVVALAAPGSAVSEADNVTIPTATIAVADSSPKRQRTEQIEEKKALDDSRRLFQRLWTDEDEIGLLQGFLEYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVLTKITSGKDFSFKSPHDQATFEISCRIWSNTGPITGPVEDDDEINLNPNPNPNFSHSMKSESMNEKRTASSRKRSRSRSEKRDMNDGSALHKDNNCNSNNNNNNNNNKDNENCNGRHTLQGLIEETVRGCLSPVLKELLVSGGMGFRNPFGFGGRGGFALNPMPMPMPMPLSLLNLGIGEIGGDDNWRKQQILELEVYSKRLELVQHEIKVALEELRSAGGG* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1501 394 MobiDBLite consensus disorder prediction 232 261 - -
Apr8g1501 394 Pfam Protein of unknown function, DUF573 107 201 IPR007592 GO:0006355
Apr8g1501 394 PANTHER BNAANNG10740D PROTEIN 1 392 - -
Apr8g1501 394 MobiDBLite consensus disorder prediction 206 284 - -
Apr8g1501 394 MobiDBLite consensus disorder prediction 11 46 - -
Apr8g1501 394 Coils Coil 367 387 - -
Apr8g1501 394 MobiDBLite consensus disorder prediction 1 53 - -
Apr8g1501 394 PANTHER BNAANNG10740D PROTEIN-RELATED 1 392 IPR007592 GO:0006355
Apr8g1501 394 Coils Coil 155 175 - -
Apr8g1501 394 MobiDBLite consensus disorder prediction 262 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1501 Apr-Chr8 24160492 24162640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1501 1 394 GeBP Transcription Factor Family AT5G28040 46.259 1.46e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Apr8g1501 DUF573 9.9e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1501 - - gsj:114372132 426.402