Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1491 ATGAGTGAGAGAGTGAAGAAGGAAAAGCAAACAGAGAAAAAGGAGAGGATGAAGAACATCTTCAAGAAGCTTCACATAGGAAGCAACCACGATCCTCATCGATCCAATGAAATTCCGCCGCCTGTACCGTCGCCGTCTTGCGCCGCCGATCACGTGCAGAGTTCCGGCGCCTCTCCGGCTAGTCCTTCGTCGTCATCTCCTTCTACGGCTGTTGTGACTCCCGGCGGCGGCGCCACTCCGGCGGTTAGTCGGCAAGACTTTTTCTCGTCGGAAGAGGAGTTTCAGGTCCAGCTAGCCCTAGCTATCAGCGCTTCCAATTCGGAGTTTCGCGATGATCCTGAGAAGGATCAGATCCATGCGGCGACGCTGTTGAGTTTGGGAGGGCATCGAATTGATTCGACGAGGGGCAAGGACGATGTGGCGGAGGCGCTATCGAGGCAGTACTGGGAATATAATGTGCTTGACTATGAGGAGAAAGTAATAGATGGTTTTTATGATGTATATGGTCTCTATAATGATTCAGCAATGCAAGGAAAAATGCCATCTCTAACAGATCTAGAGGCAAACCCTGGAGGTTCTAGCTTTGAAGTGGTCATTGTTAATCGAGCAATTGATCCTGCTCTGGAAGAGCTGATACAAATTGCACATTGTATTGCATTAGATTGTCCTGTCACTGAGGTTGGTATTTTGGTACAAATGCTTGCTGAACTTGTTACAAGCCATATGGGTGGTCCTGTAAAGGATGCTAATATGATATTAACAAGATGGACAGAAACAAGTACAGAGTTAAGGACATCTCTTCACACAATTGTATTGCCTATCGGGTCTTTAAATATTGGGCTCTCAAGGCATCGTGCTTTGCTTTTCAAGGTATTAGCTGACAACATTAAGATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCACCAGGGACACTTATCCCAGCTGATATTTTAAGCACCAAGGATAGTGCCCTTAAGTCTTACAATCCCAAGATTTTGCCAAATTTACCTTCTGCCAAAGATACTGGATTTTCTTACTCAAGACCTTTTCCACCATCTGATGGTGAAGGCAGTAGTCAAAATTCTGAGATAAAAGATCATTCGTCACCATGGAATGGAAAACCATATTTGGAGAAGTCAGAGTACATGCCTTCAAACTTGGGTTTGAGCAGAGACAGTGGTGTTGGTCCTTCTAAAATGCCTAATAGAGGGTCTCCTAACCAACTAGAAAATTTGCCAGCGTTGTCTGGTTCTTCTCTGTGCAAAGGGACTCTTGGAATGAATGCAGTTGGTGATGGGACAAGATTGAATGTCAATGTAGTACCATATACTCAGAGCAGTCCCAACGACTCTCGAAGCCTTTTTGCAGATCTTAACCCTTTCCAAATAAAAGGAACTGGGAAGGCCTCTGTGCATAACAAAACCCCGGAAAATAAATCTCCTGAGCTTAAAAATACTATTAATAATACTGTTTCTGGTCGACCACCAGTACCATTGATGTGGAAGAATCGTCATGCTTTCAACGAAGTCCCCAGGAAATCTAATCATAACCCTAATGAATATAACCCTCCTTTATTTGTTTCCAATGGTTCTTCTACATCTGAAAACATTGACCGTAGTAGTTCCAAATCATCATATGATTCAATTATAAATAATGATGTAAATGCTCAAACTTCGGCACAAGTCACTGGTTCAGTTTCACCAGTTGGTGTACCTGAGCTGAACCAGATTGAGGATCTCAATGCTGATTTTAACAGGGGGGATTTGGACAATTCTCAAAATATCATGGTAGAGGCGGTTAAAGAACCTGAAAACATTGACATCAGATATCATGACCGGAGGAAGTGCACACATGACAGATTCATGGGAAGCAATTTGAAATTAAAGGATCCAGAGAGTCCTAGCTCATCGATTGATACAAATAGGGTTGATCAAATATTGGATGATGTAGACGTTGGTGAATGTGAGATTCCATGGGAGGATTTGGTTATTGGCGAAAGAATTGGTCTAGGTTCATATGGCGAAGTATACCATGCCGACTGGAATGGCACGGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCCGGTGCTGCACTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGGAGACTACGTCATCCAAATGTTGTTCTTTTTATGGGTGCTGTTACCCGTCCTCCCAATCTCTCAATCATTTCAGAGTATCTACCAAGAGGAAGCTTGTACCGTATTCTTCATCGCCCCAATTGTCAGATTGATGAGAAAAGAAGAATAAAAATGGCTCTGGATGTGGCTAGGGGCATGAATTGCTTACACACCAGTACACCTACCATTGTTCACCGAGATCTGAAGTCTCCAAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTATGTGATTTTGGATTGTCACGCTTGAAGCACAACACGTTTTTGTCATCCAAGTCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAACCCTCAAATGAGAAATGCGATGTTTATAGTTTTGGAGTCATCTTATGGGAGCTTGCCACTCTAAGGTTGCCATGGAGTGGAATGAATCCTATGCAAGTTGTTGGTGCCGTAGGTTTCCAAAGCCGTCGACTTGATATACCTACGGAGGTTGATCCTATAGTTGCAAGAATAATCCGGGAGTGTTGGCTACAGGATCCAAATCTGCGCCCATCGTTTGCACAACTCACAGTGGCTCTAAAACCACTGCAGCGTCTGGTTATCCCATCTCATCAAGACCAGGTAGCTCCACCTGTGCCGCAGGAGATTTCTGTAAATTCCACCCCATGA 2910 0.4378 MSERVKKEKQTEKKERMKNIFKKLHIGSNHDPHRSNEIPPPVPSPSCAADHVQSSGASPASPSSSSPSTAVVTPGGGATPAVSRQDFFSSEEEFQVQLALAISASNSEFRDDPEKDQIHAATLLSLGGHRIDSTRGKDDVAEALSRQYWEYNVLDYEEKVIDGFYDVYGLYNDSAMQGKMPSLTDLEANPGGSSFEVVIVNRAIDPALEELIQIAHCIALDCPVTEVGILVQMLAELVTSHMGGPVKDANMILTRWTETSTELRTSLHTIVLPIGSLNIGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADILSTKDSALKSYNPKILPNLPSAKDTGFSYSRPFPPSDGEGSSQNSEIKDHSSPWNGKPYLEKSEYMPSNLGLSRDSGVGPSKMPNRGSPNQLENLPALSGSSLCKGTLGMNAVGDGTRLNVNVVPYTQSSPNDSRSLFADLNPFQIKGTGKASVHNKTPENKSPELKNTINNTVSGRPPVPLMWKNRHAFNEVPRKSNHNPNEYNPPLFVSNGSSTSENIDRSSSKSSYDSIINNDVNAQTSAQVTGSVSPVGVPELNQIEDLNADFNRGDLDNSQNIMVEAVKEPENIDIRYHDRRKCTHDRFMGSNLKLKDPESPSSSIDTNRVDQILDDVDVGECEIPWEDLVIGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEYLPRGSLYRILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQSRRLDIPTEVDPIVARIIRECWLQDPNLRPSFAQLTVALKPLQRLVIPSHQDQVAPPVPQEISVNSTP* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1491 969 ProSitePatterns Protein kinases ATP-binding region signature. 694 716 IPR017441 GO:0005524
Apr8g1491 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Apr8g1491 969 CDD STKc_MAP3K-like 694 937 - -
Apr8g1491 969 PANTHER SERINE-THREONINE PROTEIN KINASE 78 961 - -
Apr8g1491 969 MobiDBLite consensus disorder prediction 1 32 - -
Apr8g1491 969 Pfam Protein tyrosine and serine/threonine kinase 689 938 IPR001245 GO:0004672|GO:0006468
Apr8g1491 969 PRINTS Tyrosine kinase catalytic domain signature 762 775 IPR001245 GO:0004672|GO:0006468
Apr8g1491 969 PRINTS Tyrosine kinase catalytic domain signature 801 819 IPR001245 GO:0004672|GO:0006468
Apr8g1491 969 PRINTS Tyrosine kinase catalytic domain signature 848 858 IPR001245 GO:0004672|GO:0006468
Apr8g1491 969 PRINTS Tyrosine kinase catalytic domain signature 867 889 IPR001245 GO:0004672|GO:0006468
Apr8g1491 969 PRINTS Tyrosine kinase catalytic domain signature 911 933 IPR001245 GO:0004672|GO:0006468
Apr8g1491 969 MobiDBLite consensus disorder prediction 1 83 - -
Apr8g1491 969 MobiDBLite consensus disorder prediction 48 73 - -
Apr8g1491 969 MobiDBLite consensus disorder prediction 538 571 - -
Apr8g1491 969 MobiDBLite consensus disorder prediction 492 571 - -
Apr8g1491 969 Gene3D Phosphorylase Kinase; domain 1 681 765 - -
Apr8g1491 969 Pfam Ethylene-responsive protein kinase Le-CTR1 141 339 - -
Apr8g1491 969 SMART serkin_6 688 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1491 969 MobiDBLite consensus disorder prediction 365 438 - -
Apr8g1491 969 SUPERFAMILY Protein kinase-like (PK-like) 678 960 IPR011009 -
Apr8g1491 969 MobiDBLite consensus disorder prediction 492 519 - -
Apr8g1491 969 ProSiteProfiles Protein kinase domain profile. 688 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1491 969 MobiDBLite consensus disorder prediction 378 394 - -
Apr8g1491 969 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 78 961 - -
Apr8g1491 969 Gene3D Transferase(Phosphotransferase) domain 1 767 949 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1491 Apr-Chr8 23867665 23877110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1491 17 923 MAP Kinase Kinase Kinase AT1G08720 57.051 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Apr8g1491 PK_Tyr_Ser-Thr 2.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1491 - - aprc:113870732 1916.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1491 8 23867665 23877110 Apr8g1491 8 23867665 23877110 ECH
Apr8g1491 8 23867665 23877110 Apr4g0093 4 833211 834978 PCT