Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1490 ATGCTGGTTTTAAACGGAGAAGAGCAAATTTTGTTGCCTTCAGAGTCAACATCATTGGATTTGAACGCAGATTCCGTTGATGGGTTCCCACCGGTTTCCTCCACCGTTTACACTGATGTGGGTGTCGTGCCAGAGCACGAAAAGAACGAGCTTGAGCTCTTGATATCCAATTTAGAAAGAGAAATTGAGCAGCTGAGGATCAAGCAGAGGATATTATATAAGAAGCGCAGAGAAGCGTTGAGTAAGATATTGGACATCAAAGGGAGCATTCGTGTGTTTTGTAGGATTCGACCGAATCTGATAGCGGAGAAGAGAGGAATTTCTGAACCGGTATCGGCTGGATCAGAGAGAATTCGGGTTAAGTTGGGAGGAACAAGGAAAGATTTTGAGTTTGATAATGTTTTTCCTAAAGATGCAAGCCAAGAAAGTGTTTTTGTTGAGGTTGAGCCAATTCTAAGATCTGCAATGGACGGGCACAATGTATGTGTTTTTGCTTACGGTCAAACAGGCACAGGCAAGACATTCACCATGGATGGTACAAACGAACAGCCTGGAATTATTCCCCGTGCTCTTGAAGAGCTCTTTCGTTTAGCTTCCTCTTTGGATAATTCATCTCCTTTTACTTTTACAATGAGCATGTTGGAAGTTTATATGGGCAATCTCAGGGATCTGCTAGCTCCAAGACAGTCTGGTAGACCATATGAACCTACGACAAAGTGCAATCTCAACATCCAAACAGATCCAAAGGGATTGATTGAAATTGAGGGTCTCTCAGAAGTGCCAATTCCTGATTATGCTAAAGCCAAATGGTGGTATAACAAGGGAAGACGATTCAGATCCACCTCTTGGACTAATGTGAATGAGGCATCAAGCAGGTCACACTGCTTGACGAGGATAAACATATTTCGACGTGGGGATGCCGTGGAGGAAGCCAAAAGTGAAATAAGTAAATTGTGGATGATTGATCTTGGAGGCAGTGAACGGTTGCTTAAAACTGGAGCCAAAGGACTAACACTTGATGAGGGCCGAGCCATTAATCTTTCTCTTTCAGCTTTAGCAGATGTCATTGCAGCTTTGAAGAGGAAGAGGTGTCACGTGCCTTACAGAAATAGCAAGCTGACTCAAATACTGAAAGATTCTCTTGGTTATGGCTCAAAGGTCTTGATGCTCGTGCATATAAGCCCTTCTGAAGAAGATGTTTGTGAGACAATTTGTTCTTTGAACTTTGCAAAGAGGGCGAGAGCAATAGAGTCCAATAAAGAAGTGCCAGTGGAATTGAAGAAGCAAAAGGAGAAGAGGATTATGGAGCTGGAGGAAGACATTAACGAAGCTGAAAAACAGCGCCATACTTTAAGGGAACAAATACAGAAGGTTGAGTTGAAGTTAAGTGAGAGTAAAAGCCTCTTGTCAACTACATATACTCTTCTGGAAAGTGATGACATGGCAGCCTCTATTAGTCCCAAAGACGATGTCAAGGAGGTCATTGAAACCCCAAAAGGATCTAAGAAATCTATTAAAAGGAATTTTTCCAATTCAGTGCCTCGATTCATGAATTCAACTGTTGCAAGTCGCCAAAGGCAAAGTTCTTCTGAACAAGAAAATGGGACGAAATTGAAAAGTTTTAGATCAATGATGTCTAGAAGTTCAATCCATTTTTCACATTCCCAATCAATAAGTTATTCAGATATCCGTATCAAAGCAATCCTGCGAAGTTCAAATGGAAAATCTCGGCATGCTGAAACAAATGCTGTTCCAAGTACTGTTCTTACAGAAAGGTCTAAATGCAACGATTTGGAACCACAAGTCACAACTACTCGAAGTCAAATGGTTGCATCATCAGATCCAAACTTGAGAGTTACATTGTGTCGTCATCGAAGAAGGATGTCTGATCTGATCTAA 1899 0.4155 MLVLNGEEQILLPSESTSLDLNADSVDGFPPVSSTVYTDVGVVPEHEKNELELLISNLEREIEQLRIKQRILYKKRREALSKILDIKGSIRVFCRIRPNLIAEKRGISEPVSAGSERIRVKLGGTRKDFEFDNVFPKDASQESVFVEVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEQPGIIPRALEELFRLASSLDNSSPFTFTMSMLEVYMGNLRDLLAPRQSGRPYEPTTKCNLNIQTDPKGLIEIEGLSEVPIPDYAKAKWWYNKGRRFRSTSWTNVNEASSRSHCLTRINIFRRGDAVEEAKSEISKLWMIDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVIAALKRKRCHVPYRNSKLTQILKDSLGYGSKVLMLVHISPSEEDVCETICSLNFAKRARAIESNKEVPVELKKQKEKRIMELEEDINEAEKQRHTLREQIQKVELKLSESKSLLSTTYTLLESDDMAASISPKDDVKEVIETPKGSKKSIKRNFSNSVPRFMNSTVASRQRQSSSEQENGTKLKSFRSMMSRSSIHFSHSQSISYSDIRIKAILRSSNGKSRHAETNAVPSTVLTERSKCNDLEPQVTTTRSQMVASSDPNLRVTLCRHRRRMSDLI* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1490 632 SMART kinesin_4 87 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr8g1490 632 Gene3D Kinesin motor domain 84 462 IPR036961 -
Apr8g1490 632 PANTHER KINESIN-LIKE PROTEIN KLP-3 28 627 - -
Apr8g1490 632 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 28 627 - -
Apr8g1490 632 PRINTS Kinesin heavy chain signature 158 179 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr8g1490 632 PRINTS Kinesin heavy chain signature 284 301 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr8g1490 632 PRINTS Kinesin heavy chain signature 317 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr8g1490 632 PRINTS Kinesin heavy chain signature 366 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr8g1490 632 Coils Coil 427 461 - -
Apr8g1490 632 Coils Coil 48 75 - -
Apr8g1490 632 Pfam Kinesin motor domain 121 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr8g1490 632 ProSiteProfiles Kinesin motor domain profile. 89 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr8g1490 632 MobiDBLite consensus disorder prediction 514 538 - -
Apr8g1490 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 457 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1490 Apr-Chr8 23856909 23861055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1490 71 416 Calmodulin-binding Proteins AT5G65930 39.377 1.62e-69 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1490 - - gmx:100785581 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1490 8 23856909 23861055 Apr8g1490 8 23856909 23861055 ECH