Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1486 ATGGTTTCTGAAATCAGTTCTGTTGTTTCGAAATTGCAAATGCTATCTACTTCGGACCATGCCTCCGTTGTCTCTATGAACTTATTTGTGGCACTTCTATGTGGTTGTATTGTCATTGGCCATCTTCTTGAGGAGAATCGGTGGATGAATGAATCTATTACTGCCCTATTGATTGGTCTTTGCACTGGCGTGGTCATTTTGCTGTTTAGTGGTGGTACAAGCTCGCATATTCTTGTTTTCAGTGAAGATCTTTTTTTTATATACCTTCTGCCGCCTATCATATTCAATGCTGGGTTTCAGGTGAAAAAGAAACAGTTTTTTGTTAACTTCATCACGATCATGTTATTTGGTGCTATTGGTACATTAATATCTTGTACCATCGTAACTTTTGGTGCCACCCAAATTTTTAAGAAGTTGGATGTTGGTCCACTGGAATTAGGGGATTACCTAGCAATTGGTGCAATATTTTCTGCAACAGATTCTGTTTGCACATTGCAGGTGCTAAATCAGGATGAGACACCTTTGCTGTACAGTCTTGTGTTTGGGGAGGGTGTTGTGAATGATGCTACGTCAGTGGTGCTTTTCAATGCAATCCAAAGCTTTGACCTCAACCAACTTGACCCTACAATTGCTTTGCACTTTTCGGGCAACTTCTTGTATCTCTTTATTGCAAGCACAATGCTTGGAGTGTTGACAGGTCTACTTAGTGCTTACATTATTAAAAAGCTGTACATTGGCAGGCACTCTACAGATCGTGAGGTTGCTCTTATGATGCTAATGGCATACCTCTCCTACATGCTTGCTGAATTATGCTATCTGAGTGGCATTCTCACTGTATTCTTTTGTGGGATTGTTATGTCTCATTATACCTGGCATAATGTAACTGAGAGTTCAAGAATCACGACCAAGCATGCTTTTGCAACATTGTCATTTGTTGCTGAGATCTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAATGGAAATTTGTCAGCGATAGTCCTGGAACATCTGTAGCAGCGAGTTCAGTGTTGTTGTGTTTAATACTTCTTGGAAGAGCAGCTTTTGTTTTCCCCTTATCCTTCTTATCCAACTTGGCCAAAAAATCAACGAGTGAGAAAATCACCATCAGGCAGCAAGTAATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCTTATAATCAGTTCACCATGTCGGGACATACTTCACTGCGATGCAATGCAATCATGATCACTAGCACCATCACTGTTGTACTTTTCAGCACAGTGGTGTTTGGTTTGATGACTAAGCCACTCATAAGGCTTTTACTGCCCCATACTCCTCATCCTAAAGGCACAAACATCGCAATAAACACGGATCCATCTACTCCAAAATCAGTCACTGTACCACTTCTGGGAAGTGCCCAAGATTCTGAAGTAGATATTGATGGCCATGAAATTCATCGTCCTAGCAGCATTCGTGCCTTGCTGGCCACTCCAACACACACTGTTCATCGTTTGTGGCGCAAGTTTGATGATGCATGCATGCGTCCCGTTTTTGGTGGCAGGGGTTTTGTTCCTGTAGAACCTGGCTCACCAACTGAACGCAACGGTCATCAATGGCGTTGA 1635 0.4202 MVSEISSVVSKLQMLSTSDHASVVSMNLFVALLCGCIVIGHLLEENRWMNESITALLIGLCTGVVILLFSGGTSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMLFGAIGTLISCTIVTFGATQIFKKLDVGPLELGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNQLDPTIALHFSGNFLYLFIASTMLGVLTGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVAEIFIFLYVGMDALDIEKWKFVSDSPGTSVAASSVLLCLILLGRAAFVFPLSFLSNLAKKSTSEKITIRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTSLRCNAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHTPHPKGTNIAINTDPSTPKSVTVPLLGSAQDSEVDIDGHEIHRPSSIRALLATPTHTVHRLWRKFDDACMRPVFGGRGFVPVEPGSPTERNGHQWR* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1486 544 Gene3D - 146 197 - -
Apr8g1486 544 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr8g1486 544 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr8g1486 544 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr8g1486 544 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr8g1486 544 Pfam Sodium/hydrogen exchanger family 28 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr8g1486 544 PANTHER SODIUM/HYDROGEN EXCHANGER 7 543 IPR018422 GO:0006812|GO:0015299|GO:0016021
Apr8g1486 544 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 543 - -
Apr8g1486 544 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 27 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1486 Apr-Chr8 23773622 23779676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1486 6 542 Antiporters AT3G05030 77.365 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1486 - - gmx:100816746 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0772 4 6265598 6269511 Apr8g1486 8 23773622 23779676 PCT