Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1481 ATGGATTGCAACAAGGATGAGGCTGTGAGGGCTAGGCAAATTGCTGAGAGTAGAATGCAAAGGGGTGAATTTGTGGAGGCACTCAAGTTTGCGACCAAGGCCAAAAGCCTCTATGCTAACGTTGAAAACATTGCTCAGATCATTGCGGTTTGTCAGGTTCACAATGCTGCACACAACAAGCTCTTTGGCTCTGACATGGACTGGTATGCAATTCTTCAGACTGAAGGGTTGGCTGATGAAGCAACCGTGAAGAAACAATATAGGAAGCTTGCGCTTCTGCTTCATCCTGATAAGAATAAATTTGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGGAAGCCAATGGGGTGTTGAGTGACCAAGTAAAGCGTTCTTTATATGACATGAAGTTTAAAGCCTCTGTTAGAGTTGCTGCTCCTAAGACCCCACTCCATCCCTCAAATGAAAATGTGTTTGCCACAAAAAATCATGGAAATGCAACAAATTATCAGAAGGGTTTTTATTCGAACCCTGCTTCTTCCAACCAGCAATCTGAGCTGAGCACATTCTGGACATCTTGCCAACATTGTAATACTAAGTACCAGTACTACACACATGTTGTAAATGCAACTTTGCGCTGTCAGAAATGTTTGAAAGCCTTTAAAGCTCATGCTTTTAGTTTTGGATATCAGGGTGTCACCCTAGTATATACTACGGTGAATATCAAGAAAGAGCGTCCAACGCATGGTCACCCAAAACCAGCCTGCAATCCTGTATCTATCAAAAAATGTGATACTGGAGTTGGAGGTCTCTGTAAAGGTGAAGAGAGTAAAGATGGCTGTGTTCCTGCTTCAAAAGCCATGGAGTCACAAAGCTCTAAAAATGTTGGCAGTAAGAGAGTAAGGCAGTCAGCACCAGATGCAAGAGAAAGTTCAAATGCTGGTAAGGGTGATGACGTGAAAGATGGCAATGTTCGAGAAAATGATGTTGATCCTTCAAGACTTAATGTAAGGAGATCTTCCAGGCAAAAGCATCATGTTTCATATATGGAAACCTCTGATGTTGACGATTTTCAGGGTCCTTTGAAAAAACCACAACAAAGTGGATCATTTGATGCCAATGAAGTTGAGAAAGAGAACGTGCCTGCAGGTGGTGGGTCTTCCAGTAACAATAATCCAGCTGGTGCGATTGATCAGAGCACAGAGGTGAGGAACAAAGTAAGTAATCCACATGAAGAAACATCTTCATGTAACAAAAGCAAAGTCAAGCAATCTCATGCTCAAGGAGAGAAGGTATCCGAGTCAGACTTTGATCTTAGAACATCAGAAGAGGAGAACTGCTCTCCATTGAATTCAAATGTCTGCTCTAGTCCAGAGATCATTCATTGTCCTGATGCAGATTTCAATGATTTTGAGAAGGACAAAGCTGAGGGTTGTTTTGCTGTTAACCAGTTGTGGGCAATTTATGATACCGCTGATGCGATGCCAAGATTTTATGCTCTTGTCAAGAAAGTGACCTCCCCCTTCAAGTTGCAGATTAATTGGTTGGAACCTGACCCAGATGACGAATGTGAGATTGATTGGAATGATGCAGATTTGCCTATTGGTTGCGGTAAGTTCAAGCTTGGCGGTTCTCAGAAAACCACAGATCGTTCTATGTTCTCTCATCAGATGCAGTGCGTAAAAGGAAGTGGCAAACGTTCTTATCTTGTATATCCTTGTAAGGGAGAAACATGGGCAATTTTCAGAGACTGGGATATCAAATGGAGTTCTAATCTAGAAAATTATTTGGGGCATGACTTTCAATATGTGGAAATCATATCAGATTTTGCTGAGAATGTTGGCATTGAAGTTGCTTATCTGCGCAAGGTGGAAGGGTTTGTTAGCCTCTTTCAGAAAATGAAGAATGGAGTGAACCTATTCCGTGTTCAACCTAATGAGCTATATAGGTTCTCGCATCGAATTCCTTCATATAAAATGACTGGTAATGAAAGGAAAGGTGTTCCAAGAGGATCTTTTGAACTTGATCCTGCTGCCCTGCATACTAATATCTTTGAAGTTGGTGATTCTGGTAATGTGAAGATGGTGAATGGAACGTTCAACACTGTAGTGGAGCAGGGGGTGGCTAATGAGTACTGGCGAGGTAAGATTTCTCAATCCTTGGAAGATCATCAAAGGGACAGTGAAAGAATGGATAATGGTCGACAAACATGA 2193 0.4195 MDCNKDEAVRARQIAESRMQRGEFVEALKFATKAKSLYANVENIAQIIAVCQVHNAAHNKLFGSDMDWYAILQTEGLADEATVKKQYRKLALLLHPDKNKFAGAEAAFKLIGEANGVLSDQVKRSLYDMKFKASVRVAAPKTPLHPSNENVFATKNHGNATNYQKGFYSNPASSNQQSELSTFWTSCQHCNTKYQYYTHVVNATLRCQKCLKAFKAHAFSFGYQGVTLVYTTVNIKKERPTHGHPKPACNPVSIKKCDTGVGGLCKGEESKDGCVPASKAMESQSSKNVGSKRVRQSAPDARESSNAGKGDDVKDGNVRENDVDPSRLNVRRSSRQKHHVSYMETSDVDDFQGPLKKPQQSGSFDANEVEKENVPAGGGSSSNNNPAGAIDQSTEVRNKVSNPHEETSSCNKSKVKQSHAQGEKVSESDFDLRTSEEENCSPLNSNVCSSPEIIHCPDADFNDFEKDKAEGCFAVNQLWAIYDTADAMPRFYALVKKVTSPFKLQINWLEPDPDDECEIDWNDADLPIGCGKFKLGGSQKTTDRSMFSHQMQCVKGSGKRSYLVYPCKGETWAIFRDWDIKWSSNLENYLGHDFQYVEIISDFAENVGIEVAYLRKVEGFVSLFQKMKNGVNLFRVQPNELYRFSHRIPSYKMTGNERKGVPRGSFELDPAALHTNIFEVGDSGNVKMVNGTFNTVVEQGVANEYWRGKISQSLEDHQRDSERMDNGRQT* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1481 730 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Apr8g1481 730 SMART dnaj_3 66 123 IPR001623 -
Apr8g1481 730 MobiDBLite consensus disorder prediction 376 408 - -
Apr8g1481 730 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Apr8g1481 730 PANTHER - 1 394 - -
Apr8g1481 730 PANTHER - 401 686 - -
Apr8g1481 730 MobiDBLite consensus disorder prediction 279 293 - -
Apr8g1481 730 CDD DnaJ 67 120 IPR001623 -
Apr8g1481 730 MobiDBLite consensus disorder prediction 305 345 - -
Apr8g1481 730 Gene3D DnaJ domain 64 184 IPR036869 -
Apr8g1481 730 MobiDBLite consensus disorder prediction 268 444 - -
Apr8g1481 730 Pfam DnaJ domain 67 128 IPR001623 -
Apr8g1481 730 Pfam Domain of unknown function (DUF3444) 451 657 IPR024593 -
Apr8g1481 730 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 394 - -
Apr8g1481 730 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 401 686 - -
Apr8g1481 730 MobiDBLite consensus disorder prediction 409 436 - -
Apr8g1481 730 PRINTS DnaJ domain signature 69 87 IPR001623 -
Apr8g1481 730 PRINTS DnaJ domain signature 87 102 IPR001623 -
Apr8g1481 730 PRINTS DnaJ domain signature 103 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1481 Apr-Chr8 23731938 23734840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1481 4 216 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 2.34e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1481 - - aprc:113873604 1493.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1481 8 23731938 23734840 Apr8g1481 8 23731938 23734840 ECH
Apr4g0764 4 6220812 6225704 Apr8g1481 8 23731938 23734840 PCT