Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1468 ATGGGTTTGTTACTGTCACCACTCCATTTTTCAACTTCATATCTCAGCACAAGCACCATTGTGGCTCTATGCGTATTCTTCACACTCCTCTGTGCTTGCATCGTCATTGGCCATCTTCTTGAAGAGAACCGGTGGGCTAATGAATCCACCGTTGCCCTCCTTCTGGGGTTGTGTGCTGGAGTGGTGGTATTGCTGGTGACCAAGTTCCATAGTACCAAGATTTTAGTGTTCAGTGAAGACTTGTTCTTTCTTTACTTGCTTCCTCCCATCATTTTTAATGCCGGTTTCCAAGTGAAGAAGAAACAATTCTTCAAGAATTTCACAACTATACTGCTGTTTGGAGTCATTGGAACAGTGATTTCATTCTGTCTTATATCTATTGGTGCCTTTCTGCTCATTCAGAGGATTGGCTTAGCTAACCTTGGCATAAAAGATTACCTAGCCATTGGTGCCATACTGTCAGCAACTGACTCAGTTTGTACATTGCAGGTTCTCAGTCAAGATGAAACACCCTCTATTTACAGCATTGTATTTGGGGAGGGAGTAGTAAACGATGCTACTTCCATTGTGCTTTTCAATTCGGTCCAATCACTTGACTTCAGCAGCATCAATGCTATCAGAGCATTGAAATTATTGGGGATCTTCCTTTACCTCTTCTGCTCTAGTACCGTCCTAGGAATAGTAGTTGGCCTTTCAAGTGCTTATATTATTAAAACACTTTATCTTGGAAGGCACTCTACAGATCGTGAGGTTGCACTTATGATGTTGATGGCATATTTATCCTACATGATCGCAGAGCTTTTGAATCTCAGTGGGATTTTGACTATTTTATTCTGTGGCATTGTAATGTCACACTACACTTGGCACAATGTTACAGGAAGCTCAAGGACAACAACCAAGCACTCCTTTGCAACCATCTCGTTCATTGCTGAGACCTTTATATTTATATGTGTTGGCATGGATGCGTTGGATATTGACAAATGGAAAACCAGCAAAGCCACCCTAGGAACTTCAGTTGCTGTCAGTTCAACGTTGTTTGCATTAGTGTTGATCGGAAGAGCAGCTTTTGTGTTCCCTATTGCAAATATTACAAACTGCATCAAGGCAAGAGAGAGTACAAAAATTGAGTTCCGTTCACAGTTTATAATATGGTGGGCAGGCCTGATGAGAGGTGCAGTGACTATTGCCTTGTCTTATAGCCAGTTTGGAAAATCCAACATAACATCAGCTCAAGACTCTGCATTAATTATCACCTCTACTATAATTGTGGTCTTATTCAGTACTGTGGTGGGTTTCATATTGCATGGTTATAAATAA 1317 0.4108 MGLLLSPLHFSTSYLSTSTIVALCVFFTLLCACIVIGHLLEENRWANESTVALLLGLCAGVVVLLVTKFHSTKILVFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTTILLFGVIGTVISFCLISIGAFLLIQRIGLANLGIKDYLAIGAILSATDSVCTLQVLSQDETPSIYSIVFGEGVVNDATSIVLFNSVQSLDFSSINAIRALKLLGIFLYLFCSSTVLGIVVGLSSAYIIKTLYLGRHSTDREVALMMLMAYLSYMIAELLNLSGILTILFCGIVMSHYTWHNVTGSSRTTTKHSFATISFIAETFIFICVGMDALDIDKWKTSKATLGTSVAVSSTLFALVLIGRAAFVFPIANITNCIKARESTKIEFRSQFIIWWAGLMRGAVTIALSYSQFGKSNITSAQDSALIITSTIIVVLFSTVVGFILHGYK* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1468 438 Pfam Sodium/hydrogen exchanger family 27 433 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr8g1468 438 PANTHER SODIUM/HYDROGEN EXCHANGER 9 430 - -
Apr8g1468 438 PANTHER SODIUM/HYDROGEN EXCHANGER 9 430 IPR018422 GO:0006812|GO:0015299|GO:0016021
Apr8g1468 438 PRINTS Na+/H+ exchanger signature 81 92 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr8g1468 438 PRINTS Na+/H+ exchanger signature 95 109 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr8g1468 438 PRINTS Na+/H+ exchanger signature 110 118 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr8g1468 438 PRINTS Na+/H+ exchanger signature 150 160 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr8g1468 438 Gene3D - 142 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1468 Apr-Chr8 23568909 23576140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1468 11 430 Antiporters AT3G05030 64.524 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1468 K14724 - qsu:112009828 653.284