Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1460 ATGGAAGTTAATCCTACAACCACTGTACCTCAAGGGCCACCAACTAAGAACCATTCTTACACACAGCACCACCTACATTCAGAAAAACATATCTATAAACATAACCATATCCATTTCACCTCCAAAACCATTCTCCTAACCATTGCAGTTGTCACTTTAGTTACTGTCCTATTATTGATTTTTCTGGTCATATTCTTGATCCGTAGGCAAAAATCTTCCAACAAGAGTGGAACTTGTGAAGAAGACAGCAGAGTGCTTCATGACACAAGCAGCAGGCTCATTGCTTCAACAACGTCCAACTTTAATTCTAGCCCAGATGTGAAAGGTGGGTGCCTTCATGGGGGGAATTTGAGCAGGACCCCAGTAGCTAAAATTCGAGGAGTCCAAGTGTTCACTTACAGGGAGCTAGAAGTTGCTACGGATGGATTCAGTGAAGCAAATGTGATCGGTAATGGAGGGTATGGTTTGATGTATAGAGGAGTATTAAGTGATGGCACTTTGGCAGCAATTAAGTTGCTGTGCAGTGACGGCAAGCAAGGGGAGCGTGCCTTCAGAGTAGAGGTCGATCTCCTAAGCCGCTTGCACAGTCCTTATTTGGTGGAGTTACTTGGCTATTGTGCTGACCAATCCCACAGGTTATTGATATTTGAATACATGCACAATGGTACACTGCACCATCATCTACACTCCCCCAACAATCAAACTGAACCGTTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGGGAGGGCACTGGAATTCCTGCATGAACATGCAGCGTCACCAGTGATCCACCGTGACTTCAAGAGTAACAACGTTCTACTGGATCAAAATTTCCGTGCCAAGGTGTCAGATTTTGGATTGGCTAAGATGGGATCAGAGAAACGGAACGGTCAGGTTTCCACCCGTGTGTTGGGGACCACTGGATATCTTGCACCAGAGTACGCCTCCACGGGTAAGCTTACTACAAAGTCTGATGTTTACAGCTACGGCGTGGTTCTTCTCGAACTGCTAACAGGACGAGTACCAGTTGATATCAAGCGGCCCCCAGGAGAACACGTCCTTGTCTCTTGGGCTCTTTCAAGGTTGACAAACAGAGAAAAGGTTGTGGAAATGGTTGACCCAGCACTACGTGGACAGTACTCAAAGAAGGATTTAATTCAGATAGCTGCCATTGCAGCAATGTGCATACAACCAGAAGCTGACTACAGACCATTCATGACAGATGTTGTACAATCACTGATACCGCTAGTTAGGAACCCATCTCTTAGTTCATCCAGTTCCCTGAGATTTCAGAAACAAAAAACACCGAGTCCAAGTCACTAA 1332 0.4572 MEVNPTTTVPQGPPTKNHSYTQHHLHSEKHIYKHNHIHFTSKTILLTIAVVTLVTVLLLIFLVIFLIRRQKSSNKSGTCEEDSRVLHDTSSRLIASTTSNFNSSPDVKGGCLHGGNLSRTPVAKIRGVQVFTYRELEVATDGFSEANVIGNGGYGLMYRGVLSDGTLAAIKLLCSDGKQGERAFRVEVDLLSRLHSPYLVELLGYCADQSHRLLIFEYMHNGTLHHHLHSPNNQTEPLDWWARMRIALDCGRALEFLHEHAASPVIHRDFKSNNVLLDQNFRAKVSDFGLAKMGSEKRNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPPGEHVLVSWALSRLTNREKVVEMVDPALRGQYSKKDLIQIAAIAAMCIQPEADYRPFMTDVVQSLIPLVRNPSLSSSSSLRFQKQKTPSPSH* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1460 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Apr8g1460 443 MobiDBLite consensus disorder prediction 1 22 - -
Apr8g1460 443 Pfam Protein tyrosine and serine/threonine kinase 147 416 IPR001245 GO:0004672|GO:0006468
Apr8g1460 443 MobiDBLite consensus disorder prediction 1 20 - -
Apr8g1460 443 Gene3D Transferase(Phosphotransferase) domain 1 219 434 - -
Apr8g1460 443 Gene3D Phosphorylase Kinase; domain 1 116 218 - -
Apr8g1460 443 PANTHER OS01G0750732 PROTEIN 12 438 - -
Apr8g1460 443 CDD STKc_IRAK 149 419 - -
Apr8g1460 443 SUPERFAMILY Protein kinase-like (PK-like) 125 416 IPR011009 -
Apr8g1460 443 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 12 438 - -
Apr8g1460 443 ProSiteProfiles Protein kinase domain profile. 143 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1460 Apr-Chr8 23402189 23405308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1460 111 440 Receptor kinase-like Gene Family AT3G58690 61.607 1.51e-150 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Apr8g1460 PK_Tyr_Ser-Thr 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1460 - - gmx:100809810 692.96