Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1431 ATGGTGGATGAGCAAGATAGAGCATTGCCCATTGCAAATGTGGGTAGAATCATGAAACAAATTCTCCCTCCAAGTGCAAAGATCTCCAAAGAAGGGAAACAACTAATGCAAGAGTGTGTGACAGAGTTCATAAGTTTTGTGACTGGTGAAGCATCTGACAAGTGTCATAAGGAGAATCGCAAGACCGTTAATGGAGATGACATCTGTTGGGCTCTAAGTTCCTTAGGGTTTGACAACTATGCTGAGGCTATAGGAAGGTACTTGCATAAATACAGGCAACTTGAAAGGGAGAAAATGACTAAGAACAGGCTCGATAGCACCAAAGAAAATCATGAAGGATTACCAACAAAAACAACCACACAACTTGAGCAGCAAACTCAAATCGATCTGTAG 393 0.4148 MVDEQDRALPIANVGRIMKQILPPSAKISKEGKQLMQECVTEFISFVTGEASDKCHKENRKTVNGDDICWALSSLGFDNYAEAIGRYLHKYRQLEREKMTKNRLDSTKENHEGLPTKTTTQLEQQTQIDL* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1431 130 PRINTS CCAAT-binding transcription factor subunit A signature 36 54 - -
Apr8g1431 130 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Apr8g1431 130 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Apr8g1431 130 SUPERFAMILY Histone-fold 5 108 IPR009072 GO:0046982
Apr8g1431 130 Gene3D Histone, subunit A 1 129 IPR009072 GO:0046982
Apr8g1431 130 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-4 1 125 - -
Apr8g1431 130 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 72 IPR003958 -
Apr8g1431 130 MobiDBLite consensus disorder prediction 113 130 - -
Apr8g1431 130 MobiDBLite consensus disorder prediction 99 130 - -
Apr8g1431 130 ProSitePatterns NF-YB/HAP3 subunit signature. 39 55 IPR003956 GO:0005634|GO:0006355|GO:0043565
Apr8g1431 130 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 125 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1431 Apr-Chr8 22951672 22952064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1431 1 127 CCAAT-HAP3 Transcription Factor Family AT1G09030 65.354 5.23e-56 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Apr8g1431 CBFD_NFYB_HMF 2.1e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1431 K08065 - gmx:100815151 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1431 8 22951672 22952064 Apr8g1431 8 22951672 22952064 ECH