Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1420 ATGGTATTCTTCAGTTTTGCCTCATACTGTAATCAAACCCAAAATACTTTGTTTTTCATACTTATCTTCTTCACTTTGTTCAATGTACTCTTCAAAAGTGTAGAGTCAGTTTCCTTCAATTTTTCTAATTTCAAACCAAACTTATATCTAATAGATTTTCAGGGCGACGCCTTTTCCTCAAATGGTGTTTTGCAGCTAACAAAAAACCAACTTGATGGCCCCATCACAAGCAGTGTTGGTCGTGCCTCTTATAGTCAACCGGTGAAGCTTTGGGATAGAGGAACAAGTGAGCTCACAGACTTTACAACCCATTTCTCTTTTGTAATGAAAGCTGTTGATCCAACAATGTTTGGTGATGGGTTATCCTTCTTCATTGCACCATTTGATTCTGTGATGCCAAACAATTCAGCTGGTGGATACCTTGGTCTATTCAGCCAGGAATCAGCATTCAACACTAGCCTGAATCAAATAGTGGCTGTTGAGTTTGACAGTTTCAAGAATGAATGGGATCCAAGCTCTGATCATGTTGGAATCAATGTCAATTCCATTGTGTCAGTTACAAATGTCACTTGGAAGAGCAATATTAAGAATGGATCAATTGCTAATGCTTGGATATCATATAACTCTACCACCAAAAATCTCTCTGTCTTCCTTACTTATGCTAATAATCCAACTTTTAATGGCGATTCTAGTCTTTGGTATGTCATTGATTTGAGGCAAGTGTTGCCAGAATCGGTAAGAATAGGCTTTTCTGCTGCCACTGGTGCATGGATTGAAATACACAACATTCTGTCTTGGTCTTTCAATTCAAACTTGGACAATGGTAAAGGAAAAGGGGTCAAGATTGGTTTGGTAGTTGGTTTAAGTGTGGGTTTGGGGTCTTTAACTTGCGTTGTAGGGCTATTATGGTTTTTCTTTTGGAGAAAGAGAAATGGACAAAATGGTGGAAAGGAGGACAGCACTGGTGTTGATGCTTCTATAGATGATGAATTTGAGAGAGGAACTGGTCCAAAAAGGTTCACCTATCAGGAACTAAGCAATGCAACCAACAACTTTGAAGAAGCAGGAAAGCTTGGAGAAGGAGGATTTGGAGGTGTTTACAAAGGTTTACTTGTAAACTCCAACCTTGAAGTAGCAGTGAAGAGGGTTTCAAAAGGATCAAAACAAGGAAAAAAGGAATACATATCAGAAGTGAGAGTAATCAGCCGGCTAAGGCATAGGAACTTGGTTCAACTCATTGGGTGGTGCCATGAACAAGGTGAGCTACTTCTTGTATATGAATATATGCCTAATGGAAGCCTTGATTCTCATCTGTTTGGAAATAGAGTCATGCTTTCTTGGACAGTAAGATACAAGGTAGCCTTAGGCTTAGCATCTGCTCTTCTATATCTTCATGAAGAGTGGGAACAATGTGTGGTGCATAGAGATATTAAGTCAAGTAATGTCATGTTGGATGCAAATTTCAATGCCAAGCTTGGTGACTTTGGTCTTGCAAGGCTAGTAGACCATGAACTTGGCTCTCAAACTACTGTTTTGGCAGGCACCATGGGGTACCTAGCCCCAGAGTGTGTCACCACAGGGAAATCTAGTAAGGAGTCTGATGTTTATAGCTTTGGTGTTGTTGCACTTGAAATCACATGTGGTAGAAGACCAGTTGAGGTGAAAGAAGAGCCTGGTAAAGTTAGGCTTGTAGAGTGGGTGTGGAACCTCTATGGAAAGGGGAAACTATTTGAAGCAGCTGATGAGAAATTAAATTTGGAATTTGAGGAGCAGCAAATGGAATGCTTGATGATTGTTGGGTTGTGGTGTTGTCATCCTGATCATACCATGAGGCCTTCCATTAGGCAAGTGATAAGTGTCCTCAATTTTGAAGCTCCTTTGCCGAGTCTTCCATCCAAGTTGCCTGTCCCATTGTACTTTGCACCTCCAATGGATATGTGCAAATTCTCCTACACTACTACAACTGAAGTTACAACCACAACAAAAGGATCGTCCACATACTCATCAATGTCTGCAGGGTCCAGAAAATCTCTATTATAG 2040 0.4044 MVFFSFASYCNQTQNTLFFILIFFTLFNVLFKSVESVSFNFSNFKPNLYLIDFQGDAFSSNGVLQLTKNQLDGPITSSVGRASYSQPVKLWDRGTSELTDFTTHFSFVMKAVDPTMFGDGLSFFIAPFDSVMPNNSAGGYLGLFSQESAFNTSLNQIVAVEFDSFKNEWDPSSDHVGINVNSIVSVTNVTWKSNIKNGSIANAWISYNSTTKNLSVFLTYANNPTFNGDSSLWYVIDLRQVLPESVRIGFSAATGAWIEIHNILSWSFNSNLDNGKGKGVKIGLVVGLSVGLGSLTCVVGLLWFFFWRKRNGQNGGKEDSTGVDASIDDEFERGTGPKRFTYQELSNATNNFEEAGKLGEGGFGGVYKGLLVNSNLEVAVKRVSKGSKQGKKEYISEVRVISRLRHRNLVQLIGWCHEQGELLLVYEYMPNGSLDSHLFGNRVMLSWTVRYKVALGLASALLYLHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEITCGRRPVEVKEEPGKVRLVEWVWNLYGKGKLFEAADEKLNLEFEEQQMECLMIVGLWCCHPDHTMRPSIRQVISVLNFEAPLPSLPSKLPVPLYFAPPMDMCKFSYTTTTEVTTTTKGSSTYSSMSAGSRKSLL* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1420 679 MobiDBLite consensus disorder prediction 660 679 - -
Apr8g1420 679 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 272 IPR013320 -
Apr8g1420 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Apr8g1420 679 PANTHER RECEPTOR LECTIN KINASE 26 654 - -
Apr8g1420 679 ProSitePatterns Legume lectins beta-chain signature. 158 164 IPR019825 -
Apr8g1420 679 SMART serkin_6 352 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1420 679 SUPERFAMILY Protein kinase-like (PK-like) 336 651 IPR011009 -
Apr8g1420 679 Pfam Protein kinase domain 352 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1420 679 Gene3D Phosphorylase Kinase; domain 1 337 428 - -
Apr8g1420 679 CDD lectin_legume_LecRK_Arcelin_ConA 37 272 IPR001220 GO:0030246
Apr8g1420 679 PANTHER - 26 654 - -
Apr8g1420 679 Pfam Legume lectin domain 37 273 IPR001220 GO:0030246
Apr8g1420 679 Gene3D - 34 281 - -
Apr8g1420 679 CDD STKc_IRAK 366 622 - -
Apr8g1420 679 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Apr8g1420 679 ProSiteProfiles Protein kinase domain profile. 352 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1420 679 Gene3D Transferase(Phosphotransferase) domain 1 429 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1420 Apr-Chr8 22655905 22657944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1420 20 639 Receptor kinase-like Gene Family AT5G10530 53.281 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr8g1420 Pkinase 3.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1420 - - gmx:100777201 1078.54