Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1415 ATGAAGATGAAGGTCCCAAATTTTATTGGGGGTAAATTTGTTGATTCTCAAGGTTCTGTAATCGTTGATGTTTTAAATCCTGCAACACAAGAAGTTGTATCTCAAGTTCCTTTACCTACATATGAAGAGTTTAAAGCTGCGGTTAGTGCAGCCAAGCAAGCTTTTCCTTCATGGAAAAACACACCTATCACGACTCGTCAACGTATTATGTTTAAATTTCTGGAGCATATCCGCAGAGATATTGATAAGCTTGCCATGAATATCACCGTAGAACAGGGAAAGACATTAAAAGGTGCCCAAGGAGACGTGCTTCGTGGTTTAGACGTGGTGGAGCATACTTGTGGGATGGCAAACCTGCAGATTGGAGAATTTGTCCCTAATGTCTGTAATGGGATTGATACATACTGCATCAGAGAGCCCCTTGGAGTTTGTGCTGGAATATGCCCCTTTAACTCTTCAGCAATGATACCATTGTGGACGTTCCCTATTGCAATTACATGTGGCAACACTTTTGTTCTCAAGCCATGTGAGAAAAATCCAGGGGCTTCAATGATACTTGCAACACTAGCTAAGGAAGCTGGTTTGCCGGATGGTGTATTAAATATTATTCACGGTACCCATGATATTGTTAATTACATATGTGATGATGAAGATATAAAAGCTGTATCATTTGATGGTCCAATTACAGTAAGTTTGCACATATATGCCACGGCTGCTGCTAGAGGGAAACGTCTTCAGTCAAATGCAGGCGGCATAAATCATGTAGTTGTCATGTCTGATGCTAATTTGGATGCTACTCTAGATGCCCTTGTTCCTGCTGGCTTTGGTGCTGCAGGAGAGAGGTGCATGACTTTAAGTGCAGCAATTTTTGTTGGAGGTTCAATGCAATGGGAAGAAAAACTAGTGCAGCGTGCCAAATTGCTTAGAGTGAATGCAGGAACAGATCCTAGTGCAGACATTGGTCCAGTTATTAGCAAAGAGGCAAAGGAGAGGATATGTAGACTAGTTCAGACCAGTGTTGAAAATGGTGCTAGACTTCTACTTGATGGAAGAGACATTGTGGTACAAGGATATGAGAGGGGAAACTTTGTTGGTCCTACTATCTTATGTGATATTACAACCAGCATGGAGTGTTACAAGGAAGAAATATTTGGACCAGTTCTACTTTGCATGCAGGTTGAGAACCTAGATGAGGCTTTATCAATAATAAATAAAAGGAGAAATGGAAATGGAGCTTCTATATTCACCACATCTGGTATGGCTGCTAGGAGGTTCCAGAATGAGGTTGAGGCTGGACTGGTTGGGATCAATGTGCCAGTACCTTTGCCATTACCATTTTCCTCCAATGGGTCAAAAGCATTTGCTGGAGGTTTCAGTTTTTGTGGAAAAGCAGGAGTACAGTTTTATACCCAAATCAAAACAGTGGCACAACAATGGAAGGATATCCCTAGACGAGTAGTATTCCCTGTTGCATGCCCATCTGAGAGAGATTCACCGAGGCAAATGACACCGCGAGCCGTATCTATAGATTCTGAAAGTGATTCCCCATCCTATGAGGTACAAATGGCCATCCACGGCGCAGATATACCAAAGACAGCCTTGACATCTGCATCTCCATCAAATGATAAGGATTATAGAAGCCAGGATGTTTCCCTAGTTATTCCTTCAACATCTGAGAGGGATATGTCGGATCAGGACATGTCACTGGTACCATCACCTGCATTGCAAAGGGATTTACCTAGCCAAAGAGTATCCATAGCCACATCACAGGCATCAGAGAGGATGTATTTTTCTAAAACATCTCATTGGAATGAAAGTTCTCCAGGAACATCGCATAGGAGTGAGACTATTCTGCCAATTTCCGAGAAGAGTCATGCGTCTCTATCTCAGATAAATGGAAATATTTATACCCTGCAGAGGCCAGATGCTGCTGCAGCTTTGAAGCAAGAGGGGGGGAAATACATGTGTATGTCACGTAAAACTGATAACATAGCTCAAACATCACTAGGGAGTGATGTCAGTCCAGCGTCTCATAGGATGGATGCTACTGTGCATTCAAATTCTGACAAGGCATACATAATGGAAGCATCCCATTTGAATAAAAGTAATGGTCAAACATTTGAAAGAACAGACCCCATGTTTTCAAATTCTGAGAGATTACACAGGCCTTCAACATCTCAAAGAAATGACAAGATTGGTTCAACATCTGAAAGGACAGATATAGCCTTAACAACAGAGAGAATATATATCCCTGCAGCATCTCATAGAAATGAAAGCATTAGTCCTACATTTCAGCTTGATGATGTACAGAATATACCGGCAAGTTCAGAGATGTTATATATTCCTTCAAATTCTCAAAGAATGTATAATCAAAACCCAATAATTTCAATGGATGAATATCCCAGCCAAGCTTTACCGTCATCTCAGAGGATATAA 2436 0.4134 MKMKVPNFIGGKFVDSQGSVIVDVLNPATQEVVSQVPLPTYEEFKAAVSAAKQAFPSWKNTPITTRQRIMFKFLEHIRRDIDKLAMNITVEQGKTLKGAQGDVLRGLDVVEHTCGMANLQIGEFVPNVCNGIDTYCIREPLGVCAGICPFNSSAMIPLWTFPIAITCGNTFVLKPCEKNPGASMILATLAKEAGLPDGVLNIIHGTHDIVNYICDDEDIKAVSFDGPITVSLHIYATAAARGKRLQSNAGGINHVVVMSDANLDATLDALVPAGFGAAGERCMTLSAAIFVGGSMQWEEKLVQRAKLLRVNAGTDPSADIGPVISKEAKERICRLVQTSVENGARLLLDGRDIVVQGYERGNFVGPTILCDITTSMECYKEEIFGPVLLCMQVENLDEALSIINKRRNGNGASIFTTSGMAARRFQNEVEAGLVGINVPVPLPLPFSSNGSKAFAGGFSFCGKAGVQFYTQIKTVAQQWKDIPRRVVFPVACPSERDSPRQMTPRAVSIDSESDSPSYEVQMAIHGADIPKTALTSASPSNDKDYRSQDVSLVIPSTSERDMSDQDMSLVPSPALQRDLPSQRVSIATSQASERMYFSKTSHWNESSPGTSHRSETILPISEKSHASLSQINGNIYTLQRPDAAAALKQEGGKYMCMSRKTDNIAQTSLGSDVSPASHRMDATVHSNSDKAYIMEASHLNKSNGQTFERTDPMFSNSERLHRPSTSQRNDKIGSTSERTDIALTTERIYIPAASHRNESISPTFQLDDVQNIPASSEMLYIPSNSQRMYNQNPIISMDEYPSQALPSSQRI* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1415 811 SUPERFAMILY ALDH-like 3 482 IPR016161 GO:0016491
Apr8g1415 811 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 250 446 IPR016163 GO:0016620
Apr8g1415 811 MobiDBLite consensus disorder prediction 715 736 - -
Apr8g1415 811 CDD ALDH_F6_MMSDH 5 479 IPR010061 GO:0004491
Apr8g1415 811 MobiDBLite consensus disorder prediction 494 515 - -
Apr8g1415 811 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 2 619 - -
Apr8g1415 811 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 9 249 IPR016162 GO:0016491
Apr8g1415 811 Pfam Aldehyde dehydrogenase family 13 475 IPR015590 GO:0016491
Apr8g1415 811 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 2 619 IPR010061 GO:0004491
Apr8g1415 811 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 479 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1415 Apr-Chr8 22461931 22488768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1415 1 463 Aldehyde Dehydrogenase Gene Family AT2G14170 70.538 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1415 K00140 - gmx:100796803 1188.71