Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1407 ATGGAAGATTCAGAGGGAGAAGAGCTTCTGAATCTGACTCTTTCAGTTGCTGCTGGTAGGGAGAGGAAAAAGAAGGGAAAGATAAGGGATATTAATGCTAATTCCATTATTTTTCCTATGAGTTCTTACGAAGGCTTTGAAGGTAAGATCTTTAGGCTCCTCCAAACGAGGGAACAGATGCTAAGACAAGAGCATAGAAGAAAAGGGGTGGTTGAAGATGGGAATGGCCTCCCTTTGATTCATTTGCTTCTAACAACTGCGACTGCTGTTGATGAAAGAAACATAACTGCAGCTCTTGAGAATCTCATTGACCTGTATCAAACAGTTTCCCTAACAGGTGACTCAGTTCAACGTGTGGTGGCATATTTTGCAGATGGTTTGGCTGCAAGGCTTCTTACTAGGAAGTCACCATTCTATGACATGCTCATGGAGGAACCAACAAGTGAGGAAGAGTTTCTTGCATTCACAGATCTCTACAGAGTCTCACCCTATTACCAATTTGCTCATTTCACTGCAAACCAGGCTATTTTGGAGGCCTTTGAGGAGGAGGAAGCGAGAAACAACAAAGCACTTCATGTCATTGACTTTGATGTCTCCTATGGCTTCCAATGGCCTTGTCTTATTCAATCACTTTCTGAAAAGGCAACCAATGGCAACAGAATATCCCTGAGGATAACAGGATTTGGAAACAACCTTAAAGAGCTGCAAGAAACTGAGGCTAGATTGGTTAGCTTCTCAAAGGGTTTTAGTAACCACCTTGTTTTTGAATTCCAAGGGCTCCTGAAAGGTTCATTAAGGATCATAAACCTAAGGAAAAGGAAAAATGAAACTGTGGCAGTGAACCTTGTTTCTTATTTAAACACTTGGAGAAGTTTCATGAAGATCTCTGACACATTGGGATTTGTTCATTCTCTTAATCCCTCCATTGTGGTGTTGGTGAAACAAGAAGGTAGCAGAAGTGTGAAGACATTCTTGTCAAGGTTCACCGAGTCTTTGCACTATTTTGCAGCCATGTTTGATTCACTGGATGATTGCTTGCCACTTGAGAGCATTGAGAGGCTAAGGATTGAGAAGAAGCTTCTTGGGAAAGAGATCAAAAGTATGCTCAACCATGACATGGATGGTGTGGATTGCCCAAAATATGAGAGGATGGAAACATGGAAAGACAGAATGGAGAATCAAGGATTTGTTGGAAGAAAAATAAGCTCAAAGTGCGTGATCCAAGCGAAGCTGCTTTTGAAGATGAGGACACATTATTATCCACTACAGTTTGAGGAAGAGGGTGGTGGGGGTTTCAGAGTTTCTGAAAGGGATGAAGGAAGTGTTATCTCTTTGGGGTGGCAAAATAGGTTTCTTCTTACTGTCTCAGCATGGCAATTAGTTTGA 1386 0.417 MEDSEGEELLNLTLSVAAGRERKKKGKIRDINANSIIFPMSSYEGFEGKIFRLLQTREQMLRQEHRRKGVVEDGNGLPLIHLLLTTATAVDERNITAALENLIDLYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFEEEEARNNKALHVIDFDVSYGFQWPCLIQSLSEKATNGNRISLRITGFGNNLKELQETEARLVSFSKGFSNHLVFEFQGLLKGSLRIINLRKRKNETVAVNLVSYLNTWRSFMKISDTLGFVHSLNPSIVVLVKQEGSRSVKTFLSRFTESLHYFAAMFDSLDDCLPLESIERLRIEKKLLGKEIKSMLNHDMDGVDCPKYERMETWKDRMENQGFVGRKISSKCVIQAKLLLKMRTHYYPLQFEEEGGGGFRVSERDEGSVISLGWQNRFLLTVSAWQLV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1407 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 459 IPR005202 -
Apr8g1407 461 ProSiteProfiles GRAS family profile. 70 459 IPR005202 -
Apr8g1407 461 Pfam GRAS domain family 79 459 IPR005202 -
Apr8g1407 461 PANTHER OSJNBA0084A10.13 PROTEIN 8 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1407 Apr-Chr8 22029465 22032431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1407 75 460 GRAS Transcription Factor Family AT1G14920 35.338 1.68e-57 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr8g1407 GRAS 5.4e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1407 - - gmx:100798251 783.867