Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1405 ATGACGCCATCTCCCTCCTCCCTTCACGTGGAGGCACCGCAGCCCGGCCCAAGCCCGTTCCGAAAGATGATCGCCGTGGCATCAATTGCCGCCGGTGTGCAATTCGGTTGGGCCTTACAGTTATCCCTTTTAACCCCTTACGTTCAGACGCTCGGAGTGCCTCACGCTTGGGCCTCCTTCATCTGGCTCTGCGGCCCAATTTCCGGCCTGCTTGTCCAGCCCATAGTGGGTTACTCTAGCGACCGTTGCACCTCTCGCTTCGGTCGCCGCCGCCCGTTTATCCTCGCCGGCGCCCTCGCCGTCACCCTCGCCGTCTTCCTCATCGGCTTCGCCGCCGACCTCGGCCACGCCCTCGGCGACGATATCACCAGAAAGACTCGTCCACGCGCCGTCGGGTTCTTCGTGGTCGGCTTCTGGATCCTCGACGTCGCTAACAACATGCTCCAAGGCCCCTGCCGCGCCTTCCTCGGCGACCTTGCCGCCGGCGACCACCGCAAAACGAGAACGGCCAACGCCTTCTTCTCATTCTTCATGGCCATCGGTAACGTACTCGGATACGCTGCCGGGTCTTACGACAACCTCCACCGTCTCTTTCATTTCACGGAAACCAAAGCCTGCGATGTCTTCTGCGCTAATCTCAAAAGCTGTTTCTTCCTTTCAATTTTACTTCTTTTAGTTCTCTCTCTTATTGCGCTCGTTTGCGTAAACGACCCTCCAATTACACCACGTTGTGGTGGTGATAATAATAATGAAGGAAACGACGCGGTACCGGGGTCACCGTTTACGTGTTTCGGGGAATTGTTTGGTGCGTTTAAGGGGCTCCAGAAGCCGATGTGGATGCTGATGCTGGTGACGGCTATTAATTGGGTGGCGTGGTTCCCGTACGTGTTGTTCGACACTGATTGGATGGGGCGTGAGGTGTACGGTGGTAACGTGGGGGACAAAGCATACGATTCGGGAGTGCGTGCTGGGGCGTTGGGGCTCTTGCTCAATTCCGTGGTTCTGGCTTTCATGTCGTTAGGGGTGGAACCGTTGGGTCGTTTCGTTGGGGGCGTTAAGTGGTTGTGGGGCATCGTTAACGTTATTCTCGCCGTTTGCATGGCCATGACGGTGGTCATCACCAAGGCTGCTCAGCATGAACGGCACTTTAACGGCGTTGCCGTTGGTAGCCCCTCTCACGGCGTGAAAGCTGGCGCCTTGGCTTTTTTCTCCGTCCTTGGTGTCCCTCTTGCGATTACTTACAGCGTTCCATTTGCTCTAGCATCTATATACTCCAGCACTACAGGAGCAGGCCAAGGTTTATCTTTGGGTGTCCTCAATGTTGCAATTGTCCTGCCACAGTTGGTAGTGGCGGCACTAAGTGGACCGTGGGATGCTTTGTTTGGCGGTGGAAACTTGCCGGCTTTTGTGGTGGGTGCTGTGGCAGCCGCCGTGAGTGCCGTGATGGCAGTGGTGCTGTTGCCAACTCCAAAGCCAGCGGACGTGGCCAAGGTTTCAACCCTTCCGGCAGGGGGTTTCCATTAA 1524 0.5669 MTPSPSSLHVEAPQPGPSPFRKMIAVASIAAGVQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDRCTSRFGRRRPFILAGALAVTLAVFLIGFAADLGHALGDDITRKTRPRAVGFFVVGFWILDVANNMLQGPCRAFLGDLAAGDHRKTRTANAFFSFFMAIGNVLGYAAGSYDNLHRLFHFTETKACDVFCANLKSCFFLSILLLLVLSLIALVCVNDPPITPRCGGDNNNEGNDAVPGSPFTCFGELFGAFKGLQKPMWMLMLVTAINWVAWFPYVLFDTDWMGREVYGGNVGDKAYDSGVRAGALGLLLNSVVLAFMSLGVEPLGRFVGGVKWLWGIVNVILAVCMAMTVVITKAAQHERHFNGVAVGSPSHGVKAGALAFFSVLGVPLAITYSVPFALASIYSSTTGAGQGLSLGVLNVAIVLPQLVVAALSGPWDALFGGGNLPAFVVGAVAAAVSAVMAVVLLPTPKPADVAKVSTLPAGGFH* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1405 507 PANTHER SUGAR TRANSPORTER 13 494 - -
Apr8g1405 507 CDD MFS_SLC45_SUC 23 466 - -
Apr8g1405 507 Gene3D MFS general substrate transporter like domains 17 487 IPR036259 -
Apr8g1405 507 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 13 494 - -
Apr8g1405 507 Pfam MFS/sugar transport protein 27 187 - -
Apr8g1405 507 SUPERFAMILY MFS general substrate transporter 21 493 IPR036259 -
Apr8g1405 507 TIGRFAM GPH_sucrose: sucrose/H+ symporter 19 491 IPR005989 GO:0005887|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1405 Apr-Chr8 21957369 21961137 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1405 17 507 Sucrose Transporter Gene Family AT1G22710 64.458 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1405 K15378 - gmx:100782007 797.734