Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1399 ATGGACCCTCCACCCCCCACTAAAGCCAATGACACAAAATCCTCCTCCCTTGCTGTGGAGGGCATTCAGCCCCAAGCAAGCCCACTCCGAAAAATGATTGTAGTGGCATCCATTGCTGCTGGCATTCAATTCGGCTGGGCTCTTCAACTCTCTCTGCTAACCCCTTATGTTCAGCTTTTAGGCGTCCCACACACCTGGGCTGCCTTTATCTGGCTGTGCGGCCCAATCTCAGGATTGGTCGTACAACCTATAGTCGGCTACTACAGTGACCGTTGCACCTCTCGCTTTGGTCGCCGCCGCCCCTTCATATTCTACGGCGCTATTGCCGTCGCCATCGCTGTATTTCTCATCGGCTATGCAGCAGATATAGGACACGCTGCTGGCGACGACATCACAAAGAAAACCCGGCCCCGTGCCGTGGCAATCTTCGTGGTGGGCTTTTGGATCCTTGATGTGGCAAACAATATGCTTCAAGGACCCTGTCGTGCGTTCCTTGGTGACTTGGCCGCTGGGGACCACAAGAAGACGAGAATGGGCAATGCCTTCTTCTCATTCTTCATGGCTGTTGGGCAAGTCTTGGGGTACGCGGCAGGCTCTTTCAAAGGCCTTCACAAAATCTTCCCTTTCACTGAGACAAAAGCTTGCGACGTCTTTTGTGCTAACTTGAAGAGTTGTTTCTTTTTCTCAATTTTGTTCCTTCTCATTTTGGCTATCATTGCTCTCATTTACGTGAAAGACCCTGTGATGACAACGCCGGAATTGAGCAGAGAAGGGCAACCTTCATGCTTTTCTCAAATATTTGGCGCGTTGAAGGAACTGAAGAAGCCTATGTGGATGTTAATGATTGTGACAGCTGTGAATTGGATCGGGTGGTTCCCTTACTTTTTGTTCGACACAGATTGGATGGGTCGTGAGGTGTATGGTGGAGATGTAGGTGAGGATTCGTACGCTGCGGGAGTGCGTGCTGGGTCATTGGGGCTTATGTTAAATGCTGTCGTTTTGGGGGTGATGTCATTGGCGGTGGAACCGTTGGGTCGTATGGTTGGGGGAGTTAAGAGATTGTGGGGAATTGTTAATGTTATTCTCGCTATAGCATTCGCAATGACAGTGGTTATTTCCAAGAAAGCGGAACATGAACGCCACTTGAACCCTGCAGCCGTTGGACACCCTTCCGAAGGTGTCAAAATTAGCGCCTTGCTTTTCTTTTCAGTTGTTGGAATCCCTCTTGCGGTTACCTACAGCGTTCCGTTTGCTCTCGCTTCAATATACTCCAGCACTTCGGGAGCAGGTCAAGGTTTATCTCTGGGAGTCCTAAATCTTGCAATTGTCATTCCACAGATGGTGGTGTCGGCACTAAGTGGTCCATGGGATGCTTTGTTTGGTGGTGGCAACTTGCCAGCTTTTGTGGTGGGTGCAGTGGCTTCCGCCATCACCGCCGTGTTGGCAATTTTCCTGCTGCCGAGTCTAAAGCCTGCCGATGAGGCTAAGGCAGCTGCAAACATGGCCGCAGGAAGCTTCCACTAA 1524 0.5059 MDPPPPTKANDTKSSSLAVEGIQPQASPLRKMIVVASIAAGIQFGWALQLSLLTPYVQLLGVPHTWAAFIWLCGPISGLVVQPIVGYYSDRCTSRFGRRRPFIFYGAIAVAIAVFLIGYAADIGHAAGDDITKKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDHKKTRMGNAFFSFFMAVGQVLGYAAGSFKGLHKIFPFTETKACDVFCANLKSCFFFSILFLLILAIIALIYVKDPVMTTPELSREGQPSCFSQIFGALKELKKPMWMLMIVTAVNWIGWFPYFLFDTDWMGREVYGGDVGEDSYAAGVRAGSLGLMLNAVVLGVMSLAVEPLGRMVGGVKRLWGIVNVILAIAFAMTVVISKKAEHERHLNPAAVGHPSEGVKISALLFFSVVGIPLAVTYSVPFALASIYSSTSGAGQGLSLGVLNLAIVIPQMVVSALSGPWDALFGGGNLPAFVVGAVASAITAVLAIFLLPSLKPADEAKAAANMAAGSFH* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1399 507 Pfam MFS/sugar transport protein 41 290 - -
Apr8g1399 507 PANTHER SUGAR TRANSPORTER 21 493 - -
Apr8g1399 507 SUPERFAMILY MFS general substrate transporter 32 491 IPR036259 -
Apr8g1399 507 CDD MFS_SLC45_SUC 32 484 - -
Apr8g1399 507 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 21 493 - -
Apr8g1399 507 TIGRFAM GPH_sucrose: sucrose/H+ symporter 28 490 IPR005989 GO:0005887|GO:0008515|GO:0015770
Apr8g1399 507 Gene3D MFS general substrate transporter like domains 26 498 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1399 Apr-Chr8 21739552 21742222 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1399 5 507 Sucrose Transporter Gene Family AT1G22710 63.353 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1399 K15378 - gmx:100784153 778.859