Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1398 ATGGTGGGAATTCATGGAGTTGGTGGAATGGGTAAAACTACAATTGCACGAGGAGTGTACAACTTGATTGGTGATAGATTTGAAGGTTTGTGTTTTCTTTCTGATGTTAGAGAAATATCTAATAAGCATGGCCTATCACATCTTCAACAGATTCTGCTTACTAAAATAGTTGGAGAGAAGGATATCAAATTGGGAGATGTCAATGAAGGAGTGTCAATAATAAAACGCAGGCTCAATCGAAAGAAGGTTCTTTTAGTTCTTGATGATGTTGACAAACAACAGCAGTTGCAAGCATTGGCTGGAAGTTGTAATTGGTTTGGTTGGGGAAGCAAAATCATAATAACAACTAGAGATAAGCAATTGCTAGCAAGACATGGGGTTCAAAGAATGTATGCAACAAAAGAATTAAACAATGAAGAGGCTGGTTTGAGTAAAAGTCAAGAAAGTGTATGCACACCTAATTCCAAAATCAATCAAGTTTCTAAGAACATACCTATGGACTTTGAGAAAGTCAAAAAGATGATTGAGAAGGACCCTGTTACTGCAAGTGAAACTCTCTTGACTGGGAAGCTGTTTGTTTCGCCGAAAGCACAAAAATGCACCACTCAATCAGGACAACCTGAGGTTCAAATCCCTTCTGTTGAAGATCTACAAAAGCAACTCAAATATTTATTGACCCAATTTGACCTTGGTAGTTTAATCAGTGATGACACTCAAAGATCGACTATTTGCTCCTACATCAAAGACTTAGAGATGAAATTCGATGCTTTGCCACCAGCTCATCGAATTTTCATTCAAAATTTCAGAATTTTCTTCATTAATGCAGCCTCAAATTATAAAAAATTACACGAGGTTAGCAATAAGGAGATCAAATTGAAGGTGGAAAAAGAGGATGTTTTGAAGAAACTTGAAGAAGCCAGGGATAAAGATGAAAGAATGAGTGCCTTGATTTCATCAGCCTGCCTCAGGGTCAAGGAAATTGTATCTTCCATTGAAGAGCTCGAGGCGCAATTGGTGAATTTGAAGAAAGAAAATAAGGCATTTGAGCATGCAATCGTTGAATGCAGCAAACAAAAGGAAAATTTAAGGACTGATTGCATATCATGGGCTAATCAATCTAGGGAATTGGTTGTTCAATTGACTGAAACAGAGGAAATAGTTCAATTCCTTGAGGATCAAGTTGAAGCAGATGAAACTAGCTTTCAGGCGCTGATTGCTTCCATCCCATTTTGA 1233 0.3755 MVGIHGVGGMGKTTIARGVYNLIGDRFEGLCFLSDVREISNKHGLSHLQQILLTKIVGEKDIKLGDVNEGVSIIKRRLNRKKVLLVLDDVDKQQQLQALAGSCNWFGWGSKIIITTRDKQLLARHGVQRMYATKELNNEEAGLSKSQESVCTPNSKINQVSKNIPMDFEKVKKMIEKDPVTASETLLTGKLFVSPKAQKCTTQSGQPEVQIPSVEDLQKQLKYLLTQFDLGSLISDDTQRSTICSYIKDLEMKFDALPPAHRIFIQNFRIFFINAASNYKKLHEVSNKEIKLKVEKEDVLKKLEEARDKDERMSALISSACLRVKEIVSSIEELEAQLVNLKKENKAFEHAIVECSKQKENLRTDCISWANQSRELVVQLTETEEIVQFLEDQVEADETSFQALIASIPF* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1398 410 Gene3D - 1 129 IPR027417 -
Apr8g1398 410 Coils Coil 289 313 - -
Apr8g1398 410 PANTHER ARCHAEAL ATPASE 1 141 - -
Apr8g1398 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 141 IPR027417 -
Apr8g1398 410 Pfam NB-ARC domain 1 141 IPR002182 GO:0043531
Apr8g1398 410 Coils Coil 324 358 - -
Apr8g1398 410 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 141 IPR044974 GO:0006952
Apr8g1398 410 PRINTS Disease resistance protein signature 1 16 - -
Apr8g1398 410 PRINTS Disease resistance protein signature 77 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1398 Apr-Chr8 21671743 21674862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1398 2 141 WRKY Transcription Factor Family AT5G45050 36.170 1.16e-18 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1398 - - aprc:113873756 748.814