Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1367 ATGTCGTCTGAACCGCTAATTCAACCGTCGGAAGCATTGTCAACATCTCAGTCTTTCCGGCGATGCAACGAAACGGGGTGGATTTTCGAAGAGTTACCCAAAGCCACCATCGTTTCCGTGTCGCGACCAGACACCGGAGACATTAGTCCCATACTCCTTTCTTATACCATTGAGTTGCAGTACAAACAGTTTAAGTGGCGTCTACTGAAGAAAGCGTCACAAGTTCTGTATTTGCAGTTTGCCTTGAGGAAACGTGCATTAATTGAAGACCTTCACGACAAGCAAGAGCAGGTAAAAGAATGGCTTCAAAACTTGGGAATGGTAGATCAAACGGTAATGGTGCAAGATGATGAAGAACCTGATGATGGAGCAGTGCCTTTACATCATGAGGGCAGTGTTAAAAGCAGATATGTTCCATCGGTTGCTGCTTTATCAATAATTCGTCCATCACTAGGAGGGCAGCAGTCAGTTGCAGATAGAGCCAAAGTCGCAATGCAGGGTTATTTGAATCATTTTTTAGGAAACCTGGATATTGTGAATTCTCCAGAGGTCTGCAAGTTTTTGGAGGTCTCTAGGCTATCTTTTTTACAGGAGTATGGTCCAAAACTGAAAGAAGGATATATAACAGTGAACCATTTGTCAAATATTTCACAGGATTCATATGTATCATGCTTCCCTTGTGATTGGTTTCGTTGTTTTAATAACAAGTGGAAGAAGGTATGGGCTGTTTTGAAACCTGGGTTTTTGGCCTTGCTGGATGATCCTTTACACAACAAACCATTGGATGTAATTACTTTTGATGTCCTCCCACCCTCAAAGGAAGATGGAGGCACCAAAATATATTTAGCTGATCCTATAAAGGAACGAAATACATTCAAGGTTACTAGTGGAAATAGGAGCATATGGTTGAGAACCACCAGCAATGCTAAAGTAAAAGCTTGGGTTACTGCAATTAATGAAGCTGGTCTAAGACCCCTGGAGGGTTGGTGTTGTTCTCATCGCTTCGGTTCATTTGCTCCCACACGAGGTTTGACAGAAGATGGGAGCCAAGCCCAATGGTTTGTAGATGGGCAGGCAGCATTTGAAGCAATTGCTTCTTCAATTCAAGATGCAAAATCAGAGATATTCATTACAGGTTGGTGGCTGTGCCCAGAGCTATATCTGAGACGGCCTTTTCATTATTTTTCTACCTTTAGGTTAGACTCATTATTAGAAGAAAAAGCCAAGCAAGGGGTTCAGATCTATGTGCTTCTCTACAAGGAAGTTTCTCTAGCTTTAAAAATCAACAGCTTGTACAGTATGAGAAGACTGCTCAAAATTCATGAGAATGTGAGGGTACTGCGCTATCCAGATCATTTTGCTGCTCGTGTATATTTATGGTCACACCATGAAAAACTTGTCATTATTGATTACAAGATTTGCTATATTGGAGGATTAGATTTATGCTTTGGTCGTTATGACACACCTGAGCATAAAGTGGGTGATTGCCCCTCTGTAATTTGGCCTGGAAAGGATTATTACAACCCAAGAGAATCCGAACCTAATTCATGGGAAGAGACCATGAGAGATGAATTGGATCGTGAGAAATGTCCCCGTATGCCATGGCATGATGTCCATTGTGCTCTTTGGGGACCTCCTTGTCGTGACATTGCTCGGCACTTTGTTCAACGTTGGAACCATGCTAAGAGAACTAAAGCTCCAAATGAACATGAAATTCCACTACTTATGCCTCACCATCACATGGTCCTCCCTCATTACATGGGAAGAAGCAAAGAGATAGACATTGATGAAAAGAAAGATGAAGACAAGCCGAAAGAAATAGAAAGGCAGGATTCATTTTCCTCAGAGTCTCCAATGCAAGATATACCACTACTTCTACCTCAGGAAGCTGGTGGACTAGTTATTTCAAATGGAGATAATGCAGATTTTAGTGAAAATTCTCCATTATTGTCACAAGAGCTGGAACATGAAACTTTAGTTTCAGACACCCAGGTGAAAGGGTTTCAAGATGAAGTTGTTCCTTTCAATTTGGAGGAACAATCTGTTGTTGATGCTCTAGACAATTGGTGGGAAAATTCAGGACGTACCAATGATGACACTACTTTGGAATATGGGCAAGTTGGTCCACGTACTACCTGCCACTGTCAGGTCATCAGAAGCGTCAGCCAGTGGTCAGCTGGAACAAGTCAGCCTGAAGAAAGCATTCACATTGCATATTGTTCTCTCATTCAAAAAGCAAAGCATTTTATCTACATTGAGAACCAGTTTTTCATATCAGGTCTAGCAGGGGATGACATAATACAGAACCGTGTCTTGGAAGCACTATACAGGCGAATTTTGCAAGCCCACAAAGAACAGAAAGATTTTAGAGTTATAATTGTGATGCCCCTATTGCCTGGATTCCAGGGTGGTCTGGATGATGGTGGTGCGGCTACTGTGAGAGCCTTAACCCACTGGCAGTATAGGACAATTTCTAGAGAAAAGCACTCCATATTACACAATCTTGAGGCTATACTTGGTTCTAAGACACATGATTATATTTCTTTCTATGGTCTACGATCTCATGGTAGACTTTATGAGAATGGTCCTATGGCTACAAGTCAGGTATATGTACACAGTAAATTGATGATAATTGATGACCGTGTAGCTTTTATTGGATCATCTAATATAAATGACCGGAGTTTGCTTGGATTAAGAGACTCTGAGATTGGAGTGCTCATAGAAGACAAAGAATATGTTGAATCATTGATGAATGGAAGTCCATGGAAGGCTGGGAAATTTTCTTATAGCCTCCGCTGCTCCCTATGGTCTGAGCACCTTGGTCTTCAAACTGGAGAGATCAGTAAAGTCAGCGATCCGGTGGCAGATACAACCTATAAGGACTTGTGGTCAGCAACTGCAAAGGAAAATACTAGGATATACCATGAAGTCTTTGCTTGCATTCCCAGTGATCAGATACACTCAAGAGCTGCACTTCGGCAAAGCAAGGTTCACTGGAAGGAAAAACTTGGCCATACAACCATTGATTTGGGAATAGCCCCTGATAAGTTAGTCTCTCATGAGAATGGAGAAATAAAAGTAATAGACCCCATAGAGAAATTGAAGTGTGTAAAGGGTCATCTTGTTTCCTTTCCTTTGGAGTTCATGCGTGAGGAAGATCTAAGACCAGCTGTCATTGAGAGTGAGTTTTATGTATCTCCTCAAGTATATCATTGA 3216 0.416 MSSEPLIQPSEALSTSQSFRRCNETGWIFEELPKATIVSVSRPDTGDISPILLSYTIELQYKQFKWRLLKKASQVLYLQFALRKRALIEDLHDKQEQVKEWLQNLGMVDQTVMVQDDEEPDDGAVPLHHEGSVKSRYVPSVAALSIIRPSLGGQQSVADRAKVAMQGYLNHFLGNLDIVNSPEVCKFLEVSRLSFLQEYGPKLKEGYITVNHLSNISQDSYVSCFPCDWFRCFNNKWKKVWAVLKPGFLALLDDPLHNKPLDVITFDVLPPSKEDGGTKIYLADPIKERNTFKVTSGNRSIWLRTTSNAKVKAWVTAINEAGLRPLEGWCCSHRFGSFAPTRGLTEDGSQAQWFVDGQAAFEAIASSIQDAKSEIFITGWWLCPELYLRRPFHYFSTFRLDSLLEEKAKQGVQIYVLLYKEVSLALKINSLYSMRRLLKIHENVRVLRYPDHFAARVYLWSHHEKLVIIDYKICYIGGLDLCFGRYDTPEHKVGDCPSVIWPGKDYYNPRESEPNSWEETMRDELDREKCPRMPWHDVHCALWGPPCRDIARHFVQRWNHAKRTKAPNEHEIPLLMPHHHMVLPHYMGRSKEIDIDEKKDEDKPKEIERQDSFSSESPMQDIPLLLPQEAGGLVISNGDNADFSENSPLLSQELEHETLVSDTQVKGFQDEVVPFNLEEQSVVDALDNWWENSGRTNDDTTLEYGQVGPRTTCHCQVIRSVSQWSAGTSQPEESIHIAYCSLIQKAKHFIYIENQFFISGLAGDDIIQNRVLEALYRRILQAHKEQKDFRVIIVMPLLPGFQGGLDDGGAATVRALTHWQYRTISREKHSILHNLEAILGSKTHDYISFYGLRSHGRLYENGPMATSQVYVHSKLMIIDDRVAFIGSSNINDRSLLGLRDSEIGVLIEDKEYVESLMNGSPWKAGKFSYSLRCSLWSEHLGLQTGEISKVSDPVADTTYKDLWSATAKENTRIYHEVFACIPSDQIHSRAALRQSKVHWKEKLGHTTIDLGIAPDKLVSHENGEIKVIDPIEKLKCVKGHLVSFPLEFMREEDLRPAVIESEFYVSPQVYH* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1367 1071 SUPERFAMILY PH domain-like 232 326 - -
Apr8g1367 1071 SUPERFAMILY Phospholipase D/nuclease 312 578 - -
Apr8g1367 1071 PIRSF PLD_euk 12 1071 IPR016555 GO:0004630|GO:0006654|GO:0048017
Apr8g1367 1071 CDD PH_PLD 179 321 - -
Apr8g1367 1071 SUPERFAMILY Phospholipase D/nuclease 703 917 - -
Apr8g1367 1071 CDD PLDc_vPLD1_2_yPLD_like_1 351 496 - -
Apr8g1367 1071 PANTHER PHOSPHOLIPASE D ZETA 2 18 1068 - -
Apr8g1367 1071 Coils Coil 84 104 - -
Apr8g1367 1071 Pfam PLD-like domain 740 914 IPR025202 -
Apr8g1367 1071 ProSiteProfiles PH domain profile. 201 323 IPR001849 -
Apr8g1367 1071 MobiDBLite consensus disorder prediction 595 620 - -
Apr8g1367 1071 CDD PLDc_vPLD1_2_yPLD_like_2 727 911 - -
Apr8g1367 1071 SMART PH_update 202 325 IPR001849 -
Apr8g1367 1071 Gene3D Endonuclease Chain A 687 932 - -
Apr8g1367 1071 Gene3D Endonuclease Chain A 341 582 - -
Apr8g1367 1071 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 458 485 IPR001736 GO:0003824
Apr8g1367 1071 MobiDBLite consensus disorder prediction 595 612 - -
Apr8g1367 1071 Pfam PH domain 233 321 IPR001849 -
Apr8g1367 1071 Gene3D - 200 322 IPR011993 -
Apr8g1367 1071 Pfam Phospholipase D Active site motif 458 485 IPR001736 GO:0003824
Apr8g1367 1071 SMART pld_4 458 485 IPR001736 GO:0003824
Apr8g1367 1071 SMART pld_4 867 894 IPR001736 GO:0003824
Apr8g1367 1071 PANTHER PHOSPHOLIPASE D 18 1068 IPR015679 -
Apr8g1367 1071 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 867 894 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1367 Apr-Chr8 20910048 20920955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1367 28 1071 Phospholipase D Gene Family (Wang group) AT3G05630 65.634 0.0 1394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1367 K01115 - gmx:100796914 1939.85