Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1366 ATGATGGGCCATTTTTCGTCTGTGTTCAATGGGTTGGCAAAGTCGTTTGCAATGAAGAAAAGAAGGAATTCTGGTAGATGTAGTGGGAGAGAAGCTGCGGAAGCAATGGCAAAGGAAGCCAAAAAGAATCACTTCTTACTGCATAGCTCAGGCACCGTTAGTGTTGATGGTTCAAACAACTTTGCCTCGGTTTTCTCCAAAAAAGGCCAGAAAGGAGTGAATCAGGATTGCTGCCTAGTGTGGGAAGAATTTGGGTGCCAAGAGGACATGATTTTCTGTGGGATTTTTGATGGGCACGGGCCATGGGGTCACTTTGTGGCTAAAAGAGTAAGAGAGTTAATGCCACAATCTTTGCTATGCAACTGGCAGGAGACACTCTCACAAACTTCACTTGATCCAGATATTGACATTGAGAAAGAGAAAAAGCAACACCGATTCAATATATGGAAGCATTCATATTTGAAGACTTGTACTGCTGTTGATAGAGAATTAAAGCAAAATCGCAAGATAGATTCATTTTTCAGCGGAACAACTGCCCTGTCAATTGTTAGACAGGGTGAACTCATTGTCATTGCAAATGTTGGTGACTCTCGTGCTGTGTTGGCTACAACATCAGATGATGCAAGTTTGGTAGCAGTTCAGCTCACAGTAGATTTCAAGCCCAATTTACCTCAAGAGGCAGAGAGAATACTTGAGAGCCAAGGAAGGGTGTTTTGCTTACACGACGAGCCTGGGGTGCACAGGGTGTGGTTGCCGGATGAAGAATCTCCAGGACTTGCTATGTCTAGAGCTTTTGGTGACTACTGCATCAAAGACTATGGTCTTATTTCAGTGCCTGAGGTATGGGATGTAATCTCCAATCAAGAAGCGGTGGATATTGTATCTTCAACACCAGACAGAGGAGAATCAGCTAAACGTTTGGTGGAGTGTGCAATGCATGCATGGACACGCAAGAGGAGGGGAATTGCCATGGATGACATTTCGGCAATTTGTCTCTTCTTTCACTCTTCACCTTCACTTCACCAAGTTGCCACCCAAAAATAG 1044 0.4416 MMGHFSSVFNGLAKSFAMKKRRNSGRCSGREAAEAMAKEAKKNHFLLHSSGTVSVDGSNNFASVFSKKGQKGVNQDCCLVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRELMPQSLLCNWQETLSQTSLDPDIDIEKEKKQHRFNIWKHSYLKTCTAVDRELKQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLATTSDDASLVAVQLTVDFKPNLPQEAERILESQGRVFCLHDEPGVHRVWLPDEESPGLAMSRAFGDYCIKDYGLISVPEVWDVISNQEAVDIVSSTPDRGESAKRLVECAMHAWTRKRRGIAMDDISAICLFFHSSPSLHQVATQK* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1366 347 CDD PP2Cc 60 334 IPR001932 -
Apr8g1366 347 SMART PP2C_4 53 332 IPR001932 -
Apr8g1366 347 Gene3D - 52 336 IPR036457 -
Apr8g1366 347 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 281 - -
Apr8g1366 347 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 281 343 - -
Apr8g1366 347 PANTHER ALPHABET, ISOFORM E-RELATED 2 281 - -
Apr8g1366 347 PANTHER ALPHABET, ISOFORM E-RELATED 281 343 - -
Apr8g1366 347 ProSiteProfiles PPM-type phosphatase domain profile. 61 334 IPR001932 -
Apr8g1366 347 Pfam Protein phosphatase 2C 85 276 IPR001932 -
Apr8g1366 347 SUPERFAMILY PP2C-like 59 336 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1366 Apr-Chr8 20894859 20898423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1366 2 335 PP2C-type Phosphatase Gene Family AT3G05640 68.451 0.0 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1366 - - gmx:100793051 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0681 4 5601831 5605340 Apr8g1366 8 20894859 20898423 PCT
Apr10g1936 10 32347820 32350296 Apr8g1366 8 20894859 20898423 PCT