Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1357 ATGTCATCGAAAATGCAGTCTCACAAAGAGCACGAGGGTGACGATGGAAGAAGTCATAGAATTCCAATTCAACAGTTTAAACAGAGACACGGTGATCCAAAGATAGTAACTTTTAGTGGCTTTAATGCGCTGAGAGGGCTGGGGACGAATCATGAGTTGTACCTGGAACGTTTATTCCGAAGAGTGGTACGAGAGGAGGTGGAACATAAATTCCAGGAACATCTATATTCAAGTTGGTGCAGGGGAATGGGTAATCCGGCAAGCACATCAAGAGCCACACCCTTGGAATTGCGTTTCATAAATAAATTGCCTGATACAATTTTCACCTTTTCTAACATGACAGCAAAGGATAAAACACCCATTCAAATTGCTCTCTTTGATGTTAGATCTCAGTCAATCGTTAATGTTGGTCCCCTCTCTTTTGTAAAGACAGAGATATGTGCCCTCGATGGTGAGTTTGGTTTCAATGGAAGTGGGGATTGGACTGAAGGTGAATTCAATGTCAATATCTTGCGCGCGAGAGAGGGTAGAAGGCCATTATTGAATGGAGATAGGTTTAGTACTCTGAAAAATGGGGTGGGTTGTATCAATAAAATTATGTTCACAGATAACTCAAGATGGACAAGAAGCGGAAAATTTAGGTTGGGAGCCAAAGTTGTGCAACCAATTTCCAGTGAAGCAAACATCAGGGAAGCTAGAAGTGATCCTTTTGTTGTTAAAGATTACAGAGGAGAATCGAACAAGAAACACTACCCTCCTTACTTGCATGATGAAGTTTGGCGTTTAGAGAAAATTGCCAAAAATGGACCTATCCGTGAGCGGTTATCTCTTCATGGAATTGACACCGTTAAGGATCTCTTGCGGTTATACACGACAAACCCATCTTCGTTGTCTGAGATTGCCAAAATTTCCAAGACTTCATGGGAACATATTATTAAACATGCTAAGACATGTTTAATAGACGATGTCAAGCTTTACGTCTACCGCACAGCTGAGCAATCGATGGGCTTGCTTTTCAATTGCATCTACGTTCTTGTAGGTGTGACATTTGATGATCAAAGTTATCGTTCTTTTGATTCTCTCACCCCCAAAGAGAAGCATTTGGTGGAAATATTGAAGCGTCAAGCTTACAAAAATGTGGACAATTTCAAACTAATTGATGAGACATCATTGAGCTGCTTAAGACCATTGGAATGTCTAGGAGCCGGGCAGTCTCATGGAACAGGGCTAGGTCTTCAACCGTTGAATATCTCTACAGGACAAGAAGGTTACAAAGGAACATGGCCAAATTATGCTCAACCATATGCCTCAACTTCATATACGGATGGAGCACATAATTACCAACCCTTTGTTGATCCACTTCTAGACACAAGAGAAATGCAACCAAATAGTTCAGTAGAGGGTGGTTTTTTCTCTAGCGGATCGCATTTGCCAGTTCTGAAAGATGGTTATTCAACGGAGAATGACGGTTCACATGTTCAATTCACAAATTGTGGTGCAACAGGGGGCCAAGAAAATGCCTTTTACTTTGCCTCTTGTGATGAATTTGACAACATGAGAGCAGACTTTTGGCATTCTCATTTCTTCAATTCTACTGGGAACATACCAAGCAATGAAAAACCCAAAACATTGTGGTGTAAGATTCGGAGTGTTCTCAAGTGTGTCATATTAGCCAAAAGGGATGTCGCTGCCAAAAAGAATGCCGAGCTATTAAACTTCTACTATTAG 1728 0.4109 MSSKMQSHKEHEGDDGRSHRIPIQQFKQRHGDPKIVTFSGFNALRGLGTNHELYLERLFRRVVREEVEHKFQEHLYSSWCRGMGNPASTSRATPLELRFINKLPDTIFTFSNMTAKDKTPIQIALFDVRSQSIVNVGPLSFVKTEICALDGEFGFNGSGDWTEGEFNVNILRAREGRRPLLNGDRFSTLKNGVGCINKIMFTDNSRWTRSGKFRLGAKVVQPISSEANIREARSDPFVVKDYRGESNKKHYPPYLHDEVWRLEKIAKNGPIRERLSLHGIDTVKDLLRLYTTNPSSLSEIAKISKTSWEHIIKHAKTCLIDDVKLYVYRTAEQSMGLLFNCIYVLVGVTFDDQSYRSFDSLTPKEKHLVEILKRQAYKNVDNFKLIDETSLSCLRPLECLGAGQSHGTGLGLQPLNISTGQEGYKGTWPNYAQPYASTSYTDGAHNYQPFVDPLLDTREMQPNSSVEGGFFSSGSHLPVLKDGYSTENDGSHVQFTNCGATGGQENAFYFASCDEFDNMRADFWHSHFFNSTGNIPSNEKPKTLWCKIRSVLKCVILAKRDVAAKKNAELLNFYY* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1357 575 Pfam Calmodulin binding protein C-terminal domain 324 383 IPR046829 -
Apr8g1357 575 MobiDBLite consensus disorder prediction 1 20 - -
Apr8g1357 575 Pfam Calmodulin binding protein-like N-terminal domain 95 241 IPR046831 -
Apr8g1357 575 PANTHER OS02G0177800 PROTEIN 1 566 IPR012416 GO:0005516
Apr8g1357 575 PANTHER CALMODULIN-BINDING PROTEIN 1 566 - -
Apr8g1357 575 Pfam Calmodulin binding protein central domain 255 318 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1357 Apr-Chr8 20788405 20792966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1357 53 399 Calmodulin-binding Proteins AT5G26920 41.457 5.46e-77 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1357 - - gmx:100806598 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1357 8 20788405 20792966 Apr8g1357 8 20788405 20792966 ECH