Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1336 ATGGCGTCTTTCCAGCCGAACATAGATTCCAGTAATTCGGACACGTTGCGAGAATCCAATCACAAGAAGCGCAAGAAAATCGGAGATCCCGCCGGCGAACGCAATTCCCTTAACCTCATCCCGTGGAGCTCCGAGGTGGAGCAGCGGATCTACTCCCGCCGCCTCGTCGAGGCTCTCCGCCGGACTACGTCATCGGCGACCAAGCCTAGAGCCGCCGGTCAAGTCCGCGAGACCGCCGACCGAGTCCTCGCCGCCACCGCTAAGGGAAGAACGCGGTGGAGCCGCGCGATTCTCCGCCGCTGGAAGAAGCTCCAGAGGCAGCACAAGAAGGTGAAGAAAGTATCCGCCGGATTGAAGAGAACCGGGATTGGCGGTGAGAGAAGGAGCCGGTTACCGGCTGTGCAGAAGAAAGCGCGCGTTCTCAGCCGGCTGGTTCCCGGTTGCCGGAAGGTCTCGTTTCCGAACCTTCTGGAAGAAGCTAGTGACTATATTTCGGCGTTGGAGATGCAAGTGCGAGCCATGACGGCTCTCGCCGAGATACTCTCCGGTAGCGCGCCGGACTCGCCGGTGGCGTGTTGA 579 0.6045 MASFQPNIDSSNSDTLRESNHKKRKKIGDPAGERNSLNLIPWSSEVEQRIYSRRLVEALRRTTSSATKPRAAGQVRETADRVLAATAKGRTRWSRAILRRWKKLQRQHKKVKKVSAGLKRTGIGGERRSRLPAVQKKARVLSRLVPGCRKVSFPNLLEEASDYISALEMQVRAMTALAEILSGSAPDSPVAC* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1336 192 PANTHER TRANSCRIPTION FACTOR BHLH150 16 188 - -
Apr8g1336 192 MobiDBLite consensus disorder prediction 15 31 - -
Apr8g1336 192 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 16 188 IPR044660 GO:0006355
Apr8g1336 192 MobiDBLite consensus disorder prediction 1 34 - -
Apr8g1336 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 128 184 IPR036638 GO:0046983
Apr8g1336 192 CDD bHLH_AtIBH1_like 123 178 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1336 Apr-Chr8 20174192 20175175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1336 3 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 44.737 2.57e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1336 - - aprc:113873135 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1336 8 20174192 20175175 Apr8g1336 8 20174192 20175175 ECH
Apr4g0657 4 5417384 5418094 Apr8g1336 8 20174192 20175175 PCT