Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1335 ATGTCGGACACGAAAGACACAGAGCAATACGGTGTCCTCCTCTATTACAAGTATGCACACATTCCGAACCTCGACGACCTCCTCACCTTTTACCACTCCAACTGCTCCTCCCTCTGCCTCCTCGGTCGTGTTCGCCTTTCTCCCGACGGCGTCAATGTCACCGTTGGCGGCTTCTTATCCTCTTTGGAGAGCCACATTGAAGCTCTCAAGGCCCATAATACCTTGTTTCACGACACCGATTTCAAGCTCGCAACCTGTCATCACCCGTTAAACGACAAAGTTGCTGAAGAGTGTGGATTCACTTCTCTCTCGATTCGGATCGTCAAGGAACTTGTTACTCTCAGTTCTCATCCCCTACTGAAGTCTCCAGAGATCTCGAATGCTGGAAGGCATCTCTCTGCGGATGAGTTCCATTCTTCCCTTCTGAATGCTAACAAGGAGAGTCCGGAAAATGGCTTTGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGGAAATTTCATGCACCGAATGTTGAAACTTTGGATCCTCAAGTTAGGCAGTATAGTGATTTCTCTTCATGGATAGATGACAATGGTGATCGGTTGAAAGGAAAAAATATCCTCATGTATTGTACTGGCGGAATCAGGTGTGAAATGGCATCAGCATATATTAAGTCAAAGGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGCATCCAACGGTATTTGGAGCAATTTCCAGATGGTGGTTTTTTCAAAGGAAAGAATTTTGTTTTTGATCACCGGATATCAGTTGGAAGTTCAGATCCTAATATTATTGGTACCTGCCTTATTTGTCGCTGTTCATTTGATGATTACTCTTCACGCTGCCGATGTACTTACTGCAGAATGCTTGTTTTGGTTTGTTGTAATTGCCAGAATGAATCTGCACAATATGTTTGTGAGCTATGCGAAAAGCAGGGCAAGGCTGTTAGGTCAAAGCAGTTAATTGAAGATGGTGAATCAAAAACGTCATTGCCAGGGGTTGAGTTGCAGAACTTTTCTTCAGATACTATGTTCTTGCCTCAAGTGCCTAGGGGAGATGATGTAAGGACCTCAAGAAAACTGAGAATCTTATGCTTGCATGGGTTTCGGCAGAATGCATCCAGTTTTAAGGGAAGAACAGCGTCATTAGCCAAAAAGCTCAAGAAAATTACTGAATTTGTTTTTATTGATGCACCTCATGAATTGCCATTCATTTACCAAACCCCTGTGTCGGCTCTCAATGTGAATTGTGCACCATCATCATCATCATTGCTACCTAGTCCTCCTCCACCTTTGGAGAATTGCAGGAAGAAGTTTGCATGGTTTGTGGCATCCAACTCTGATGGAAGTAGCGGTCCTGATTGGAAGGTAGCAGATGGCCCATTTGATCCGCTTCAATACCTGGAGCAAACTTTTGGCTACGATATTTCAATTTCACACTTGAAGAATGTGTTTTCCCAAGAAGGACCCTTTGATGGAATCTTGGGCTTTTCACAAGGTGCCGCAATGGCTGCCTTAGTCTCTGCACAAGAAGAAAAGCTGAAAGGTTGA 1569 0.4372 MSDTKDTEQYGVLLYYKYAHIPNLDDLLTFYHSNCSSLCLLGRVRLSPDGVNVTVGGFLSSLESHIEALKAHNTLFHDTDFKLATCHHPLNDKVAEECGFTSLSIRIVKELVTLSSHPLLKSPEISNAGRHLSADEFHSSLLNANKESPENGFVLLDARNLYETRIGKFHAPNVETLDPQVRQYSDFSSWIDDNGDRLKGKNILMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDPNIIGTCLICRCSFDDYSSRCRCTYCRMLVLVCCNCQNESAQYVCELCEKQGKAVRSKQLIEDGESKTSLPGVELQNFSSDTMFLPQVPRGDDVRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKITEFVFIDAPHELPFIYQTPVSALNVNCAPSSSSLLPSPPPPLENCRKKFAWFVASNSDGSSGPDWKVADGPFDPLQYLEQTFGYDISISHLKNVFSQEGPFDGILGFSQGAAMAALVSAQEEKLKG* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1335 522 Pfam Rhodanase C-terminal 251 316 IPR022111 -
Apr8g1335 522 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 118 263 IPR036873 -
Apr8g1335 522 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 521 - -
Apr8g1335 522 SMART rhod_4 139 246 IPR001763 -
Apr8g1335 522 Gene3D alpha/beta hydrolase 363 522 IPR029058 -
Apr8g1335 522 Pfam Serine hydrolase (FSH1) 365 520 IPR005645 -
Apr8g1335 522 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Apr8g1335 522 Gene3D - 1 112 - -
Apr8g1335 522 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
Apr8g1335 522 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 521 IPR020936 -
Apr8g1335 522 Gene3D - 121 273 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1335 Apr-Chr8 20018847 20029910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1335 5 522 Sulfurtransferasese or Rhodanese AT1G09280 64.672 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1335 - - gmx:100786152 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1335 8 20018847 20029910 Apr8g1335 8 20018847 20029910 ECH