Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1332 ATGGCAACCAAGCCCAAGTCTAAACACAAGCCCAAGCGCAAGCCCAAATCCGGGTCGCCCACCTCTCCCTCCTCCGCTTCAGCCTTCTTCAAACCGGGCACTGCCGTGGAAGTCAGCTCCGACGACGACGGCTTCCGCGGCTCTTGGTTTTCTGGCATCGTCATCCGTCGCCTCGCGTCCGACCGCTTCCTTGTCGAGTACGACAACCTGATGGAAGACGAGCAAAGCTCGAAGCGCCTGAGAGAAGTTCTCAATCTCCGCCACCTCCGGCCACTTCCCCCGTCGGAGACCGGCCGGGAATTCAAGTTCGGCCAGGAGGTGGACGCGTTCCACAACGATGGCTGGTGGGAGGGCCACATCACTCAAGAATTGGGAAATGAAAGGTTCGCAGTGTATTTCAGAGCCTCTAGAGAGCAATTGGTGTTTCCAAAGGAGCGACTGAGGCTCCATCGCGAGTGGCTCAATTTCAATTGGGTCCCACCAATTCAACAATCACAAAAACAGGATAATGATTTGAAGGAAATGCAGTTGACGCTGCCAAATGTGAAGTCTGTTGAAACTGTGAAGGAGGATGTGTTTAGCGTAGGAAAACTAGTTGAGGTTAGCAGTGACGAAGACGGGTTCAGTGGAGCTTGGTTTGCTGCCACTATTGTTGAGGTAATGGGAAATGTGAAGTTCATTGTTGAGTACCAGAATCTACTGGCTGATGATGATTCCCAGCTTTTGAAAGAGGAGGTTGATGTTCTGCACATAAGGCCTCATCCGCCAGACACTTGTGTTATTGATCAATTCAGTCTTCTTGATGAGGTTGATGCTTTGTACAATGATGGTTGGTGGATCGGTGTGATTTCTAAAGTTCTTGATGATTGGAGGTATATAGTGTATTTCAGGACCACTAATGAAGAACTAGAGTTTCAGCACTCCCACTTGAGGATGCATCAAGACTGGATTGATGGCAAATGGGTCATGCCTTCCAAGGCGTTGATGTTGTGA 993 0.4995 MATKPKSKHKPKRKPKSGSPTSPSSASAFFKPGTAVEVSSDDDGFRGSWFSGIVIRRLASDRFLVEYDNLMEDEQSSKRLREVLNLRHLRPLPPSETGREFKFGQEVDAFHNDGWWEGHITQELGNERFAVYFRASREQLVFPKERLRLHREWLNFNWVPPIQQSQKQDNDLKEMQLTLPNVKSVETVKEDVFSVGKLVEVSSDEDGFSGAWFAATIVEVMGNVKFIVEYQNLLADDDSQLLKEEVDVLHIRPHPPDTCVIDQFSLLDEVDALYNDGWWIGVISKVLDDWRYIVYFRTTNEELEFQHSHLRMHQDWIDGKWVMPSKALML* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1332 330 Pfam Agenet domain 104 162 IPR008395 -
Apr8g1332 330 Pfam Agenet domain 33 94 IPR008395 -
Apr8g1332 330 Pfam Agenet domain 196 256 IPR008395 -
Apr8g1332 330 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 5 326 - -
Apr8g1332 330 MobiDBLite consensus disorder prediction 1 32 - -
Apr8g1332 330 MobiDBLite consensus disorder prediction 1 16 - -
Apr8g1332 330 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 5 326 - -
Apr8g1332 330 SMART agenet_At_2 191 259 IPR014002 -
Apr8g1332 330 SMART agenet_At_2 28 97 IPR014002 -
Apr8g1332 330 SMART agenet_At_2 99 155 IPR014002 -
Apr8g1332 330 SMART agenet_At_2 262 318 IPR014002 -
Apr8g1332 330 Gene3D - 179 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1332 Apr-Chr8 20005954 20008575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1332 203 316 PHD Transcription Factor Family AT5G58610 29.412 2.73e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1332 - - aprc:113871596 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1332 8 20005954 20008575 Apr8g1332 8 20005954 20008575 ECH