Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g1317 | ATGGACGAGACAAAAAACATAAGAAACATATGCATACTGGCACACGTGGACCACGGCAAAACAACGTTGGCCGACCACCTGATCGCGGCGGCTGGCGGCGGCGTGGTCCACCCGAAGCTAGCGGGTCGGGTCAGGTACATGGACTATCTGGACGAGGAGCAACGCAGAGCCATCACAATGAAGTGCTCCTCCATCCTCCTCTGCTACAACCCCCACTCCATCAACCTCATCGACTCACCCGGCCACGTTGACTTCTGCAGCGAGGTATCCAGTGCCGCCCGGCTCTGCGACGGCGCTCTCCTCCTCGTGGATGCCGTGGAGGGCGTCCACATCCAAACCCGCGCCGTCCTCCGCCAATGCTGGATTGAACGCCTCACCCCTTCCCTCGTCATCAACAAAATCGATCGCCTAATCACCGAGTTGAAGCTCTCTCCCTCCGAAGCCTACACTCGTCTCTCGCGTATCGTTCATGAAGTTAACTGCATCTTTAGTGCCTTCAAGTCTCAGAAATATTTATCTGACGTGGACATGGGCTCTCATTTAGACGACAACGAGGAGGATGCGTTTCAGCCGCAAAAAGGGAATGTCGTTTTTGCTTGTGCTTTGGATGGTTGGGGTTTTGGTATTAATGAGTTTGCTGAGATATATGCGTCAAAGCTTGGTGCAAGTGTGAACGCCTTGCGGAGAGCGTTGTGGGGTCCATGGTATTTTAATCCCAAGACTAAGATGATTGTTGGCAAGAAAGGGATTTGTGGTGCTATGGACAAGGATAAGACTATGTTTGTTCAGTTTGTTTTGGAGCCATTGTGGCAAGTGTATCAGGGAGCTTTACAAGGGGATAGAGGGTTGCTTGAGAAAGTTATTAGGTCGTTTAATTTGTCTGTTCCCGCGCGAGAATTGAAGAATAAGGATGCTAAAGTGGTGCTTCAGGCGGTTATGAGCTGCTGGCTTAAGCTTTCGGATACTGTTTTGTCTATGGTTGTTAGGTTTATGCCTGACCCTGTGATGGCACAGTCGTTTCGTATATCCAGGCTCATTCCAAAGAAGTGGGAGGAGGAGGCGGCGGTGAGGAAAGCGGTGGAGGTGTGTGATTGTAGGCCTCATGTTCCTTGTGTTGCTTTCGTGTCGAAGATGTTGGTTGTCCCTGTTAAGATGCTTCCTCCTGGTTATGAAGATGAGGAGGAGGAGTTGGATGAATGTTTCTTGGCATTTACTAGGGTCTTTAGCGGGGTTTTGTCCGCAGGGCAGAGAGTTTATGTTCTTTCTGCTCTGTATGATCCTCTAAAAGGGGAAACAAAGCATATACAGGAGGCTGAATTGAAATCGCTGTATTTGATGATGGGCCAAGGGTTTAAAGAAGTGTCATCTGCTAAAGCAGGAAATATTGTTGCTATCCGAGGCCTTGGCCAGCATATATATAAGACTGCTACCCTTTCCTCTACTAAGAACTGTTGCCCTTTTTCGAGTATGGCTTTCCAAGTTGCCCCGGCTTTGAGAGTTGCAATTGAGCCATCTGAGCCTGCGGATGTGGCCGCACTGCACAAAGGCTTGGAGCTTCTGAATATAGCAGATCCATTTGTTGAGGTCACATTTTCTGCAAGAGGAGAGCATGTTCTTGCTGCTGCTGGCCAAGTTCATCTTGAGAGATGCATAAAGGATTTGAAGGAGAGGTTTGCGAAAGTAAGCTTGCAAGTCTCTCCGCCTCTTGTGTCCTACAAAGAGACCATTGAGGGAGATGTTTCCAATGTGCTGGAAGATTTTAACTTTCTAAGTAGGATATCAGGTTATGTGGAAAAGACAACATCCAATGGAAGATGTGTTGTTCGGGTGAAAGTGATGAAACTTCTACCTTCTGTTGTAAAGGTGCTCCATGAAAACTCTGATTTACTTGCAGATATCATTGGAATGAAGTCAGGGAAGACAGTAAAACGTTTGGAAATACAGGGACCCAGTATTCTTGAAAATGACAAGCCAGCTGAAGCGCTGAAAAAACGCATATTGGATGCAGTGGAGAGTGATATTTTGAGCAGGAATGAAAATGACAAGGACTATGCCGAGAAATGTAAATTGACGTGGCTTAAGATACTGAGGAGAATATGGGCACTTGGACCAAGCCATATTGGTCCTAACATTCTCTTTACTCCTGATATTAACGCAGAAAACACTGATAGCTCTGTTCTAATACGTGGTTGTTCTCGTCTATCTGAAAGGATGGGCTTTGTAGATTCTAGTATCAGTGATTCCATTGCTGAGACATCTTCAAATGTGGATGCTGAGCACCTTGAGGATAGTGTTATAGCTGGGTTCCAAAATGCTACCTCAGCTGGACCATTGTGTGATGAACCTATTTATGGTTTGGCATTTATCATTGAGGCACGCATATCTCCACTTTCAAAGCATCAAGAAGAATCTGAAACACACCAACAATCCCAGCAGAGTGGCACCTTTGCAGGGGAGGTTATGGGAGCTGTAAAAGATGCTTGTAAAGCAGCTGTGCTTCAGAATAAGCCTCGCCTTGTGGAAGCATTGTACTTTTGTGAATTGAATACTACTACTGAATATTTAGGTCCCATGTATGCTGTACTTGCCCGAAGACGAGCACGAGTTTTGAAGGAAGAGATGCAAGAAGGTTCCCCTTTCTTTACTGTGCATGCATATGTTCCTGCTTCTGAGAGCTTTGGTTTTGCAGATGAGCTTAGAAGGTGCACTTCTGGTGCAGCAAGTGCACTTCTTGTACTTAGCCACTGGGAAGCACTTACAGAGGATCCTTTCTTTGTACCTAAAACAGCGGAGGAAATTGAAGAGTTTGGAGATGGCTCTAGTGTTCTTCCAAATACAGCAAGAAAGTTAATTGATGCAGTTAGACGGCGTAAAGGCCTTCCTGTGGAGGAAAAGGTTGTGCAGCATGGAACCAAGCAACGGACACTGGCTCGTAAAGTCTGA | 2943 | 0.4655 | MDETKNIRNICILAHVDHGKTTLADHLIAAAGGGVVHPKLAGRVRYMDYLDEEQRRAITMKCSSILLCYNPHSINLIDSPGHVDFCSEVSSAARLCDGALLLVDAVEGVHIQTRAVLRQCWIERLTPSLVINKIDRLITELKLSPSEAYTRLSRIVHEVNCIFSAFKSQKYLSDVDMGSHLDDNEEDAFQPQKGNVVFACALDGWGFGINEFAEIYASKLGASVNALRRALWGPWYFNPKTKMIVGKKGICGAMDKDKTMFVQFVLEPLWQVYQGALQGDRGLLEKVIRSFNLSVPARELKNKDAKVVLQAVMSCWLKLSDTVLSMVVRFMPDPVMAQSFRISRLIPKKWEEEAAVRKAVEVCDCRPHVPCVAFVSKMLVVPVKMLPPGYEDEEEELDECFLAFTRVFSGVLSAGQRVYVLSALYDPLKGETKHIQEAELKSLYLMMGQGFKEVSSAKAGNIVAIRGLGQHIYKTATLSSTKNCCPFSSMAFQVAPALRVAIEPSEPADVAALHKGLELLNIADPFVEVTFSARGEHVLAAAGQVHLERCIKDLKERFAKVSLQVSPPLVSYKETIEGDVSNVLEDFNFLSRISGYVEKTTSNGRCVVRVKVMKLLPSVVKVLHENSDLLADIIGMKSGKTVKRLEIQGPSILENDKPAEALKKRILDAVESDILSRNENDKDYAEKCKLTWLKILRRIWALGPSHIGPNILFTPDINAENTDSSVLIRGCSRLSERMGFVDSSISDSIAETSSNVDAEHLEDSVIAGFQNATSAGPLCDEPIYGLAFIIEARISPLSKHQEESETHQQSQQSGTFAGEVMGAVKDACKAAVLQNKPRLVEALYFCELNTTTEYLGPMYAVLARRRARVLKEEMQEGSPFFTVHAYVPASESFGFADELRRCTSGAASALLVLSHWEALTEDPFFVPKTAEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHGTKQRTLARKV* | 981 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g1317 | 980 | SUPERFAMILY | EF-G C-terminal domain-like | 494 | 568 | IPR035647 | - | |
Apr8g1317 | 980 | TIGRFAM | small_GTP: small GTP-binding protein domain | 7 | 138 | IPR005225 | GO:0005525 | |
Apr8g1317 | 980 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 570 | 840 | IPR020568 | - | |
Apr8g1317 | 980 | Gene3D | Translation factors | 334 | 493 | - | - | |
Apr8g1317 | 980 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 5 | 224 | IPR000795 | GO:0003924|GO:0005525 | |
Apr8g1317 | 980 | SMART | EFG_C_a | 838 | 927 | IPR000640 | - | |
Apr8g1317 | 980 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 496 | 571 | - | - | |
Apr8g1317 | 980 | Gene3D | - | 1 | 211 | IPR027417 | - | |
Apr8g1317 | 980 | CDD | EF2_II | 370 | 481 | - | - | |
Apr8g1317 | 980 | Pfam | Elongation factor G C-terminus | 839 | 923 | IPR000640 | - | |
Apr8g1317 | 980 | CDD | EF2 | 8 | 217 | - | - | |
Apr8g1317 | 980 | Gene3D | - | 837 | 971 | - | - | |
Apr8g1317 | 980 | PANTHER | ELONGATION FACTOR-LIKE GTPASE 1 | 5 | 979 | - | - | |
Apr8g1317 | 980 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 332 | IPR027417 | - | |
Apr8g1317 | 980 | CDD | aeEF2_snRNP_like_IV | 567 | 845 | - | - | |
Apr8g1317 | 980 | Gene3D | - | 593 | 835 | IPR014721 | - | |
Apr8g1317 | 980 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 5 | 979 | - | - | |
Apr8g1317 | 980 | SUPERFAMILY | EF-G C-terminal domain-like | 841 | 939 | IPR035647 | - | |
Apr8g1317 | 980 | SUPERFAMILY | Translation proteins | 356 | 490 | IPR009000 | - | |
Apr8g1317 | 980 | Gene3D | Yeast translation eEF2 (G' domain) | 212 | 317 | - | - | |
Apr8g1317 | 980 | PRINTS | GTP-binding elongation factor signature | 9 | 22 | IPR000795 | GO:0003924|GO:0005525 | |
Apr8g1317 | 980 | PRINTS | GTP-binding elongation factor signature | 55 | 63 | IPR000795 | GO:0003924|GO:0005525 | |
Apr8g1317 | 980 | PRINTS | GTP-binding elongation factor signature | 75 | 85 | IPR000795 | GO:0003924|GO:0005525 | |
Apr8g1317 | 980 | PRINTS | GTP-binding elongation factor signature | 91 | 102 | IPR000795 | GO:0003924|GO:0005525 | |
Apr8g1317 | 980 | PRINTS | GTP-binding elongation factor signature | 127 | 136 | IPR000795 | GO:0003924|GO:0005525 | |
Apr8g1317 | 980 | Pfam | Elongation factor Tu GTP binding domain | 5 | 282 | IPR000795 | GO:0003924|GO:0005525 | |
Apr8g1317 | 980 | Pfam | Elongation factor Tu domain 2 | 402 | 478 | IPR004161 | GO:0005525 | |
Apr8g1317 | 980 | CDD | eEF2_snRNP_like_C | 841 | 919 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g1317 | Apr-Chr8 | 19621869 | 19625592 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g1317 | 1 | 980 | Eukaryotic Initiation Factors Gene Family | AT3G22980 | 65.073 | 0.0 | 1316 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g1317 | K14536 | - | pvu:PHAVU_003G003900g | 1497.26 |