Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1316 ATGGGTGATGATCTTAAAGCTGAGTTGTCTGAGAAAACTCCGGTTTGGGGTCTTAAGGTTTGGGAAATAATTGGAATTGCAGTTGGATTGTTTATTATTGTGATCCTCTGTGTGCTTTCATTTTGCCTCACTTCAAGGAAGAAATCTAGAAAAGCTAGGGAAAGGATTCCTGTTAGTCATATACCTGCTGTTTCAAAGGAAATAAAGGAAGTGAGGGTTGAGCAAGTACCGGCAAATGGATTTGTTCCTCGTGAAGGAATACTTCTTACAATTCACGACAAATCCGGTGACAAAGAATCAGACAAAGTTATGGTTCATTTAGGTGTTGGGAAGATGATGCCTGGGGATAGCGGCAGTCACTCAGATTCGTTTCATTACTTGGAGAAAGATGGAGGTGGCTCACAATCAGGGGAAGAAGTTAGCTCTGGCACGGTTAGGATGTACAAGGCCTCTTCTTCATACCCCATAACAGCTCCTTCACCCCTCTCTGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACACTGAGGGATCTTGAACTTGCTACAAACCGTTTTTCAAAAGAAAATGTGATTGGTGAGGGTGGGTATGGAGTTGTTTACCGGGGACAGTTGATCAACGGGACTCCAGTAGCAGTTAAAAAGATACTCAACAACATTGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGACATGTCCGACATAAAAATTTGGTTCGTCTTTTGGGGTACTGCATGGAGGGGACTCACAGGATGTTAGTCTATGAGTATGTCAATAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGCCACCATGGATATCTTACCTGGGAAGCACGTATCAAGATTCTCCTTGGCACAGCTAAGGCGTTTGCATATTTGCATGAAGCGATTGAGCCAAAGGTGGTACACCGAGATATCAAGTCAAGCAACATATTAATTGATGATGACTTTAATGCTAAGGTTTCTGATTTTGGCCTGGCCAAGTTACTGGGTTCTGGGAAGAGTCATGTTGCAACGCGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGTCTTCTAAATGAAAAAAGTGACGTTTATAGCTTTGGTGTTGTGCTATTGGAGGCAATTACAGGAAGAGATCCAGTTGACTATAGTCGTCCAGCACAGGAAGTTAATATGGTTGATTGGCTTAAGATGATGGTTGGAAACAGGCAATCTGAAGAAGTGGTAGACCCAAACATTGAGATGAGACCATCTACCAGATCTCTGAAACGGGCTCTCTTAACTGCTTTGAGATGTGTAGATCCAGATTCTGAGAAAAGACCCAAGATGGGTCAAGTTGTGCGAATGCTCGAGTCAGAGGAGTACCCTTTACCAAGAGAGGACCGTAGGCAGCGTAGAAATCGTGGTGGCGTTAGCACAGAAATTGAATCTCAGAAGGATTGTTCTGACACAGACGGGAGTGACATTCAGGGTTCTAGATCAGAAATTGGAAGGTCCTTCGTATTTTCATATACTTCTATGTATATAATTTTTTCATGTGAAAAAGATCTTAGAAGCACTGGTGATGGAGAGAAAATGTAG 1611 0.4283 MGDDLKAELSEKTPVWGLKVWEIIGIAVGLFIIVILCVLSFCLTSRKKSRKARERIPVSHIPAVSKEIKEVRVEQVPANGFVPREGILLTIHDKSGDKESDKVMVHLGVGKMMPGDSGSHSDSFHYLEKDGGGSQSGEEVSSGTVRMYKASSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVIGEGGYGVVYRGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCMEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKAFAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGSGKSHVATRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYSRPAQEVNMVDWLKMMVGNRQSEEVVDPNIEMRPSTRSLKRALLTALRCVDPDSEKRPKMGQVVRMLESEEYPLPREDRRQRRNRGGVSTEIESQKDCSDTDGSDIQGSRSEIGRSFVFSYTSMYIIFSCEKDLRSTGDGEKM* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1316 536 MobiDBLite consensus disorder prediction 463 493 - -
Apr8g1316 536 Pfam Protein kinase domain 190 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1316 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Apr8g1316 536 CDD STKc_IRAK 195 461 - -
Apr8g1316 536 ProSiteProfiles Protein kinase domain profile. 189 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1316 536 Gene3D Phosphorylase Kinase; domain 1 171 264 - -
Apr8g1316 536 SMART serkin_6 189 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1316 536 Gene3D Transferase(Phosphotransferase) domain 1 265 476 - -
Apr8g1316 536 PANTHER OS01G0323000 PROTEIN 3 503 - -
Apr8g1316 536 MobiDBLite consensus disorder prediction 463 502 - -
Apr8g1316 536 SUPERFAMILY Protein kinase-like (PK-like) 173 467 IPR011009 -
Apr8g1316 536 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Apr8g1316 536 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1316 Apr-Chr8 19573913 19581261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1316 166 463 Trihelix Transcription Factor Family AT1G70460 49.835 1.82e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Apr8g1316 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1316 - - gmx:100778269 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1316 8 19573913 19581261 Apr8g1316 8 19573913 19581261 ECH
Apr8g1316 8 19573913 19581261 Apr4g0635 4 5274938 5279771 PCT