Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1312 ATGGGCGGGGGCGGAGGCGGAGCGACGGCGCTCGCAGAGGCGCAGTATTCGTCGGCGAAGACGTCGGTGTGGTGGGACATTGAAAACTGCCATGTTCCGAAAGGGTGCGATCCCCACGCCATTGCGCAGAACATTAGCTCCGCACTCGTTCGCATGAACTACTGTGGCCCCGTTTCCATCTCCGCCTACGGCGACACCACTCGCATCACTGCCTCCGTTCAACACGCTCTCTCCAGCACCGGCATATCCCTCAACCATGTCCCCGCCGGCGTCAAAGATGCAAGTGACAAAAAGATTCTTGTTGACATGCTATTCTGGGCAGTGGACAATCCTGCACCTGCTAATTACTTATTAATTTCTGGTGACCGAGACTTCTCCAATGCACTTCATCAATTGCGGCTGAGGAGGTATAATATTCTTCTTGCACAACCTCAAAACGCTTCTGCACCCTTAGTTGCAGCTGCTAAGAGTGTATGGCTTTGGACTAGTCTTTTAGCTGGAGGACCTCCTCTTATGAATGGCGAATCACAACAACTTGGTAATAATAGCATCCAATCATCTTCTGACACCTTATCAATTCCAGTCTCTAATGCTGTTCAGATACCGCAGCACGTGGATTCCTTCTCAGAAGTTTATACAGGAAATCAGAAATTTCCAAACACCGGAAGGCAATTTGATTCTAGACAAAATGGGAAAACGACTGGGAGAAATTCAGGTAAACCAAATGGACCCAAGGCCATGCATGCTGCCCCTATTGGACTTCAAGAAAATTGTGCCAATATAAACTCTTCACGACCTGGCAACTATAGCCCTAATGTTCCCCCAAGTGGATCTTCCCTAAATTTTATTCATAGCAACCCTGATCAGTTGTGGGGAAATAATGGTAATCTACAGAGCAATCATCAAAATTCCTATTCACAGCCAGTAAGATCAAACAGTTTTCCTTTGCAACCTCCTTTGGCATCAAGTAATTCATTTTCTTCAATTTCCCAAACTTTTGCAACTTCAATAGTGCCACATAGGACTGGTGGACCCATCCTCTCTGCAGGACCACTTACAAATGCACCACCAGATATTGGCAATCTGAACATTTCTGGATATCCTAGTAATGCTTCCTATCCTCACCCTGTTAAACAAAGGAATAGAGACTCTAAAAAGAGTTCTAACAGTAATGGTTTAAATCCTGTAAGGTCAACTGACGAACAAAATGGACATATGGTACATAGTGTACAGCAATTGTATAATGGCTATCCGCATGGTCCAGAATACCAACCGTCTTCATTGGCATCGATGGGTAGTAATAACCTTCCTGGAAATGATATGTGGGGATCTTCAGGATGCACTAAACCTTCTGAATACATCCAAGGTCTAATAGGGGTTGTTTTACTTGCTTTGAACACACTAAAAACTGAACAAATTATGCCAACTGAATCGAATATAACAGATTGCATTCGATATGGAGATCCCAAGCACCGCAACACTGACATCAAGAAGGCCCTGGACAGTGCTATTGAGCAGCAGATGGTGGTTAAGCAGAATGTAGGTGCTTTGCAGTTGTATGTTGGTAAGAATGATAAGGTTTGGAAGTGTGTAAACCCAATAGGTGGAAATCCTAAGCAGCACTCACAAGAAACATGGAATGAAATTAAAAAATTTCTAAGTACTCCTTCTGGAAGATCAGCGATAATGGGTACTCTGTGCAAGTATGAAGCAGGTATTGTGATTAAGAATATGTGCTTGAAAAATCATTCTTTAGGTGATGTCCTTCAAATTTTGAACATGGTGATTACCCTTAAAAAATGGATGGTGCATCATCAGTCAGGCTGGCAACCACTTAACATCATTCTTGCTGAGGACAATTCTGATTCAGAGGTCATAGCATGCCCATAA 1890 0.4376 MGGGGGGATALAEAQYSSAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRMNYCGPVSISAYGDTTRITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRLRRYNILLAQPQNASAPLVAAAKSVWLWTSLLAGGPPLMNGESQQLGNNSIQSSSDTLSIPVSNAVQIPQHVDSFSEVYTGNQKFPNTGRQFDSRQNGKTTGRNSGKPNGPKAMHAAPIGLQENCANINSSRPGNYSPNVPPSGSSLNFIHSNPDQLWGNNGNLQSNHQNSYSQPVRSNSFPLQPPLASSNSFSSISQTFATSIVPHRTGGPILSAGPLTNAPPDIGNLNISGYPSNASYPHPVKQRNRDSKKSSNSNGLNPVRSTDEQNGHMVHSVQQLYNGYPHGPEYQPSSLASMGSNNLPGNDMWGSSGCTKPSEYIQGLIGVVLLALNTLKTEQIMPTESNITDCIRYGDPKHRNTDIKKALDSAIEQQMVVKQNVGALQLYVGKNDKVWKCVNPIGGNPKQHSQETWNEIKKFLSTPSGRSAIMGTLCKYEAGIVIKNMCLKNHSLGDVLQILNMVITLKKWMVHHQSGWQPLNIILAEDNSDSEVIACP* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1312 629 CDD PIN_limkain_b1_N_like 20 144 - -
Apr8g1312 629 PANTHER LIMKAIN B LKAP 3 614 IPR024768 GO:0005777|GO:0010468|GO:1903231
Apr8g1312 629 Pfam OST-HTH Associated domain 567 621 IPR025677 -
Apr8g1312 629 MobiDBLite consensus disorder prediction 213 240 - -
Apr8g1312 629 MobiDBLite consensus disorder prediction 386 403 - -
Apr8g1312 629 MobiDBLite consensus disorder prediction 213 326 - -
Apr8g1312 629 Pfam NYN domain 20 156 IPR021139 GO:0004540
Apr8g1312 629 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 3 614 - -
Apr8g1312 629 MobiDBLite consensus disorder prediction 360 377 - -
Apr8g1312 629 MobiDBLite consensus disorder prediction 360 403 - -
Apr8g1312 629 MobiDBLite consensus disorder prediction 256 326 - -
Apr8g1312 629 Gene3D - 12 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1312 Apr-Chr8 19516550 19520647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1312 12 261 C2H2 Transcription Factor Family AT5G61190 58.400 1.64e-82 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1312 - - gmx:100794384 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1312 8 19516550 19520647 Apr8g1312 8 19516550 19520647 ECH