Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1298 ATGCCAATGTCCAACCTCTTCTTGATTCCCATTGTTACAACACTTGTTTTCAGCTGCTGGGTTCATGCCTCTGCTGGTGCTCCCTATCAACGTCACCGCATCAATGAGACGCACTTTTCTTTGTTGGAGCCTTATGAAGCTTCCTCATCCCTCATTGGGAGGCCTCCTCTCATGGTTGGATTCACCCTTATTCAAACTGCGGCTGCTAAAGGAGCTGTTTGCTTAGATGGAACATTGCCTGGTTATCATTTGCATCGGGGATATGGATCAGGAGCAAATAGCTGGATCGTTAATTTAGAGGGAGGTGGGTGGTGTAATAACGTTAGAACATGTGTTTTTCGGAAGAAAACACGGCGTGGATCATCAACATTCATGGAAAAAGAGATACCTTTTACCGGAATACTAAGCAATAAAGCTGAAGATAATCCAGATTTTTTCAACTGGAACAGAGTAAAAATTCGTTATTGTGATGGTGCCTCTTTCACTGGGGATGGTGAAGATAAGGTTGCACAACTGCAATTTAGAGGACAACGTATTTGGTTGGCTGCAATGGAAGATTTGATGTCAAAGGGAATGCGTTTTGCCAACCAGGCTCTTCTTTCTGGATGCTCTGCGGGTGGTCTGGCTACTATTATACATTGTGATGAATTTCGAGGTCTATTCCCACAAACTACCAAAGTGAAATGTCTCAGTGATGCTGGGTTATTTCTTGATGCGATTGATGTGTCTAGAGGGCATACCCTTAGGAATTTTTTCAGTGGTGTTGTAAACCTGCAGGGAGTGCAGAGGAATCTGCCTCACGTTTGTACTAATCACCTTGATCCCACTTCGTGCTTCTTCCCTCAAAACTTGATTGCCGGTATTAGAACCCCTCTATTCATTCTTAACACTGCCTATGATTCATGGCAGATACAATCAAGCTTAGCTCCTCCAACAGCAGATCCACATGGCTATTGGCATGATTGTAGATTAAATCATGCTAAATGTACTACTTCACAAATTCAATTTTTACAAGGATTCAGGAATCAAATGCTGAATGCTATTAGAGGCTTCTCAAGATCAAATCAGAATGGATTGTTCATAAATTCATGTTTTGCTCACTGCCAATCCGAGAGGCAGGATACATGGTTTGCTGATAATTCTCCTGTCATTGGGAAGAAGGCAATTGCTCTGGCTGTTGGAGATTGGTATTTCGACCGAGCTGCAGTTAAGGCCGTTGATTGTCCTTACCCTTGTGATAATTCATGCCACCATCTTGTATTCAGATGA 1269 0.4271 MPMSNLFLIPIVTTLVFSCWVHASAGAPYQRHRINETHFSLLEPYEASSSLIGRPPLMVGFTLIQTAAAKGAVCLDGTLPGYHLHRGYGSGANSWIVNLEGGGWCNNVRTCVFRKKTRRGSSTFMEKEIPFTGILSNKAEDNPDFFNWNRVKIRYCDGASFTGDGEDKVAQLQFRGQRIWLAAMEDLMSKGMRFANQALLSGCSAGGLATIIHCDEFRGLFPQTTKVKCLSDAGLFLDAIDVSRGHTLRNFFSGVVNLQGVQRNLPHVCTNHLDPTSCFFPQNLIAGIRTPLFILNTAYDSWQIQSSLAPPTADPHGYWHDCRLNHAKCTTSQIQFLQGFRNQMLNAIRGFSRSNQNGLFINSCFAHCQSERQDTWFADNSPVIGKKAIALAVGDWYFDRAAVKAVDCPYPCDNSCHHLVFR* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1298 422 PANTHER PECTIN ACETYLESTERASE 7 421 - -
Apr8g1298 422 PANTHER NOTUM-RELATED 7 421 IPR004963 GO:0016787
Apr8g1298 422 Pfam Pectinacetylesterase 57 401 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1298 Apr-Chr8 19306227 19310966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1298 58 422 Carbohydrate Esterase AT1G57590 72.877 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1298 K19882 - gmx:100793403 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2397 9 31476109 31482040 Apr8g1298 8 19306227 19310966 ECH
Apr8g1298 8 19306227 19310966 Apr8g1298 8 19306227 19310966 ECH
Apr4g0623 4 5165025 5169017 Apr8g1298 8 19306227 19310966 PCT