Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1273 ATGGGAGTCTTCACATTCGTTCTCCGCAAATCCGGCAGCGAATGGTCTGCCAAGCAATTCTCCGGCGACATCGAGGCCTCCGCTGACTCCACCTTCGACCTCCAACGGAAGCTCGTTCATGCCGCTCTCGCCGTTGATTCCTCCGGCGCCGTTCAGTCCTCTTTCTCTGTGGTGGACCCTTCCTCCGCTGTCTTCCAGGTGGTAGTGGGTGGTGCAGTGTTCGTTGGAGGTGGTGCTGTTGCTGCAGCAGCTCCTGCAGGAGTTGCTGCCTCAGCTGGAGAGGCGGCCCCGGCTGAGAAAAAGGAAGAAAAGGTGGAGGAAGAGGAAGAAGATGAAGACTTGGGATTGTCACTCTTTGATTAG 363 0.5702 MGVFTFVLRKSGSEWSAKQFSGDIEASADSTFDLQRKLVHAALAVDSSGAVQSSFSVVDPSSAVFQVVVGGAVFVGGGAVAAAAPAGVAASAGEAAPAEKKEEKVEEEEEDEDLGLSLFD* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1273 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 120 IPR044252 GO:0003735|GO:0005840
Apr8g1273 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 120 - -
Apr8g1273 120 Pfam 60s Acidic ribosomal protein 72 119 - -
Apr8g1273 120 MobiDBLite consensus disorder prediction 91 120 - -
Apr8g1273 120 MobiDBLite consensus disorder prediction 104 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1273 Apr-Chr8 17807189 17808589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1273 1 68 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 67.647 2.93e-27 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1273 K02942 - gmx:100804776 108.612