Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1272 ATGTCCAAACCCTGGGGTAACATCGGAGCCTGGGCCGCTGATTCCGAGCGGGCCGAGGCCGAGGAGCGCGAGGCCCAGGCTGCTGCCGCCGTTAACGAGGCCCAAAACTTTCCCAGCCTCAAGGAAGCCGTCAACGCCAAGCCCAAAAAGAAGAAAAGCACCACCGTGACGCTTTCTGAGTTCAACAGAGGCAGTTATGCCTCCGGCGAGAACCAGGGCTTAACGCCCGATGAGCTTCTCCGTCTCCCTACCGGTCCGAAGGACCGTTCCGGCGAGGAAATGCAGTTCAATCGCCTCGGCGGTGGCTTTTCCTCTTACGACCGCTCCGGTCCCCGCACGCGAGACCGCGACGGCGGCAACAACGACGGTTCCTGGGGCGGGGGAAGGAGATCCTACGGTGGATTTGATGAAGAACGCAGGGGACCAGTTTCTAGGGTTTCGGAGTTCGATCAGCCGTCGAGGGCTGATGAGGTAGACAATTGGGCGTCGGTGAAGAAACCTCTCCCCTCGTTCGATTCAGGCCGGCAAAATCGATACAGTGGCGGCGGCGGTGGCGGTAGTGGCGGTTTTGGTGGTGCATCAAGGGCCGATGGTGTGGATAATTGGGCGGTTGGTAAGAAGCCTCTTTCTGTTAGATCTTCCACGTTTGGTTCTGGCTATCGTGATTCCGGCGTGGAGCATGATCGATGGACGAGGGGTGCGCCGCGTGACGTGGAGCCTGATCGATGGACGAGGGGCGCTCCCCGTGAAGTGGAGCGGCCGAGGTTGGTGTTGGATCCCCCTAGAGGCGATGGTTCGGTGAATGAAGCCCCAGTGAAGACGAATAAGCCGAGTCCGTTCGGCGCGGCGAGGCCGAGGGAGGAGGTGTTAGCTGAGAAGGGTTTGGATTGGAAGAAGATGGATTCGGAGATTGAGGCGAAGAAGACGAGCCAACCCACGAGTGCACATTCTAGCAGGCCTTCTAGTGCCCAATCTAGTCGTTCTGAGGGTCCCGGGTTGCAGGGGACTGATACTGTGCCTAAATCAAAGCCTAAGGTGAACCCCTTTGGGGACGCCAAGCCTAGGGAGGTTTTGCTGGGCGAGCGAGGCATGGATTGGCGGAAGATTGATCTTGATTTGGAGCATCGTGGTGTTGACAGGCCTGAGACAATGGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTGAAGAAGGAACTTGAAAAAGAATCTACAATAAACTCAAATTATGAATCTGTGGATGAGGCTGGTGGAGACCAAACCATTGCACTTGCATTGTTAGCACAGAAAGAAAGGGAGCTGGAGCTTCTTATCCATGATTTGGATGACAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCAGGTTCATCGGCAGGAAAAGCTACTGCTTCTTCTGATAGGCCACCTTCTCGTTCCAGCTCATTTGAGGATTCTAGAAGTGTGGATTTTGCAGACAGACCTCAATCCCGTGGCACAGGAGATATGTGGATGCGTCCTAGTGATGACAGAAGACAATTTCAAGGTAGCAGGGAAAGGGGATGGTTTTCAGGTAGCAGAGATTTGAATAGGTCAAGGTCAAGAGAGAGATGGTGA 1596 0.5426 MSKPWGNIGAWAADSERAEAEEREAQAAAAVNEAQNFPSLKEAVNAKPKKKKSTTVTLSEFNRGSYASGENQGLTPDELLRLPTGPKDRSGEEMQFNRLGGGFSSYDRSGPRTRDRDGGNNDGSWGGGRRSYGGFDEERRGPVSRVSEFDQPSRADEVDNWASVKKPLPSFDSGRQNRYSGGGGGGSGGFGGASRADGVDNWAVGKKPLSVRSSTFGSGYRDSGVEHDRWTRGAPRDVEPDRWTRGAPREVERPRLVLDPPRGDGSVNEAPVKTNKPSPFGAARPREEVLAEKGLDWKKMDSEIEAKKTSQPTSAHSSRPSSAQSSRSEGPGLQGTDTVPKSKPKVNPFGDAKPREVLLGERGMDWRKIDLDLEHRGVDRPETMEEKLLKEEIDNLKKELEKESTINSNYESVDEAGGDQTIALALLAQKERELELLIHDLDDKVRFGQKAVERPGSSAGKATASSDRPPSRSSSFEDSRSVDFADRPQSRGTGDMWMRPSDDRRQFQGSRERGWFSGSRDLNRSRSRERW* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1272 531 MobiDBLite consensus disorder prediction 459 478 - -
Apr8g1272 531 Coils Coil 13 33 - -
Apr8g1272 531 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 531 IPR010433 GO:0003743
Apr8g1272 531 MobiDBLite consensus disorder prediction 1 20 - -
Apr8g1272 531 Coils Coil 386 413 - -
Apr8g1272 531 MobiDBLite consensus disorder prediction 57 72 - -
Apr8g1272 531 MobiDBLite consensus disorder prediction 132 161 - -
Apr8g1272 531 MobiDBLite consensus disorder prediction 307 335 - -
Apr8g1272 531 MobiDBLite consensus disorder prediction 286 306 - -
Apr8g1272 531 MobiDBLite consensus disorder prediction 517 531 - -
Apr8g1272 531 MobiDBLite consensus disorder prediction 450 531 - -
Apr8g1272 531 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 531 - -
Apr8g1272 531 MobiDBLite consensus disorder prediction 222 259 - -
Apr8g1272 531 MobiDBLite consensus disorder prediction 40 358 - -
Apr8g1272 531 Pfam Plant specific eukaryotic initiation factor 4B 1 514 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1272 Apr-Chr8 17779899 17786463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1272 1 531 Eukaryotic Initiation Factors Gene Family AT3G26400 53.710 9.40e-148 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1272 - - gmx:100784238 731.48