Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1247 ATGGCAATAACACCTTTTGGCAGTACATCGGCTGCACAATGGGGAATTCGTCCTCAGCTATTGCTAAGATCCAGTTTGACAGGCAAGGTTGCATCATCCAGCAACAACTTTCCTTGCAGTGTTAGGTTAAGCTTTTTTGCTGCAACAAGTTCAAGTTTTTTTTCTCAGAATTCCTTGCATATGCTTCTTAATGTGGGCTCATCCCAAACATTTAATCGTCACAAGGGATCGAGGTTGATTGTTAGAGCAGATGCAGATTATTATTCTGTCCTTGGGGTTTCAAGAAATGCTAGTAAACCTGAAATTAAGAGTGCTTATCGGAAGCTTGCTCGGAATTATCATCCAGATGTGAACAAAGAACCTGGAGCTGAACAGAAATTTAAGGAAATCAGCAATGCATATGAGGTGTTATCAGATGATGAGAAACGATCCATATATGACAGATTTGGAGAGGCTGGGCTTAAAGGTTCTGGAATGGGCATGGGGGATTTCAGCAATCCTTTTGATCTGTTTGAATCACTGTTTGAGGGCATGAATCGTGGCGCGGGTCCCAGAGGTTCTTGGAATGGAGCAATTGATGGTGAAGATGAGTATTACAGTCTTGTTCTGAACTTCAAAGAAGCAGTTTTTGGTGTAGAAAAAGAGATAGAGATAAGCCGATTAGAGAGTTGTGGAACTTGCAATGGTTCAGGTGCTAAACCAGGGACTACACCATCCAGATGTAGCACTTGTGGAGGTCAAGGCCGGGTTGTCTCATCAACAAGAACTCCATTGGGCATTTTCCAGCAGTCAATGACATGCTCTTCATGCAGTGGGACTGGAGAGGTTTCAACACCTTGCAATACATGTTCCGGGGATGGTCGGGTGAGGAAAACAAAGCGGATAAGTCTGAAGGTCCCAGCCGGTGTGGACTCTGGTAGTCGATTAAGGGTCCGAAATGAGGGGAATGCTGGTAGGAAAGGGGGTTCCCCTGGTGACCTCTTTGTTGTTATTGAGGTTATCCCAGATCCTGTCCTTAAACGAGATGACACCAACATCTTATACACCTGTAAGGTTTCTTATATTGATGCTATCCTGGGGACTACAATTAAGGTCCCTACTGTGGACGGAATGGTGGATTTAAAAATTCCTGCTGGAACTCAACCGAACACAACACTGGTTATGGCTAAGAAAGGTGTACCCTTGCTGAATAAAAATAATATGAGGGGTGATCAATTGGTTCGTGTGCAAGTTGAAATCCCTAAAAGACTAAGCAGTGATGAGAGAAAACTCATTGAGGAACTTGCTGATTTAAGCAAAGGCAAGACTGCCACTGGTAGGAGATAA 1326 0.4374 MAITPFGSTSAAQWGIRPQLLLRSSLTGKVASSSNNFPCSVRLSFFAATSSSFFSQNSLHMLLNVGSSQTFNRHKGSRLIVRADADYYSVLGVSRNASKPEIKSAYRKLARNYHPDVNKEPGAEQKFKEISNAYEVLSDDEKRSIYDRFGEAGLKGSGMGMGDFSNPFDLFESLFEGMNRGAGPRGSWNGAIDGEDEYYSLVLNFKEAVFGVEKEIEISRLESCGTCNGSGAKPGTTPSRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCSGTGEVSTPCNTCSGDGRVRKTKRISLKVPAGVDSGSRLRVRNEGNAGRKGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPLLNKNNMRGDQLVRVQVEIPKRLSSDERKLIEELADLSKGKTATGRR* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1247 441 CDD DnaJ_zf 224 287 IPR001305 GO:0031072|GO:0051082
Apr8g1247 441 ProSiteProfiles dnaJ domain profile. 86 150 IPR001623 -
Apr8g1247 441 SUPERFAMILY HSP40/DnaJ peptide-binding domain 339 425 IPR008971 GO:0006457|GO:0051082
Apr8g1247 441 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 33 441 - -
Apr8g1247 441 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 211 291 IPR036410 -
Apr8g1247 441 Gene3D - 224 287 - -
Apr8g1247 441 Gene3D DnaJ domain 83 185 IPR036869 -
Apr8g1247 441 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Apr8g1247 441 Gene3D - 194 329 - -
Apr8g1247 441 SUPERFAMILY Chaperone J-domain 83 179 IPR036869 -
Apr8g1247 441 SMART dnaj_3 85 142 IPR001623 -
Apr8g1247 441 Gene3D - 334 440 - -
Apr8g1247 441 TIGRFAM DnaJ_bact: chaperone protein DnaJ 86 430 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Apr8g1247 441 ProSiteProfiles Zinc finger CR-type profile. 211 292 IPR001305 GO:0031072|GO:0051082
Apr8g1247 441 Pfam DnaJ domain 86 147 IPR001623 -
Apr8g1247 441 Pfam DnaJ central domain 224 287 IPR001305 GO:0031072|GO:0051082
Apr8g1247 441 CDD DnaJ 86 139 IPR001623 -
Apr8g1247 441 CDD DnaJ_C 195 417 - -
Apr8g1247 441 Pfam DnaJ C terminal domain 199 414 IPR002939 -
Apr8g1247 441 Hamap Chaperone protein DnaJ [dnaJ]. 83 437 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Apr8g1247 441 PRINTS DnaJ domain signature 88 106 IPR001623 -
Apr8g1247 441 PRINTS DnaJ domain signature 106 121 IPR001623 -
Apr8g1247 441 PRINTS DnaJ domain signature 122 142 IPR001623 -
Apr8g1247 441 PRINTS DnaJ domain signature 142 161 IPR001623 -
Apr8g1247 441 PANTHER BNAA01G34580D PROTEIN 33 441 - -
Apr8g1247 441 SUPERFAMILY HSP40/DnaJ peptide-binding domain 192 347 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1247 Apr-Chr8 17445989 17451285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1247 86 164 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.250 2.43e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1247 K03686 - gmx:100811006 803.512