Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1218 ATGACGCAGCAGAATGTGCTCCTGTCCAAGACTAGTAAATCTGGGAATGGGATCGACAGGGCTATAACCCTTCCCCAAAAGCCACCCTCCGCACCAGGAGGCTACATTCCCATTCCAAGGAGAAGGGTTTTGAAGAACCTTGAAATCAATGGAGACGGAGGACAAAGAATCAGTGCATGGCTTGACTCCATGAGAGCCTCTTCTCCAACCCATGTCAAATCCACTCCTTCTTTCGCAGAAGAACACACCTCTTGGATTCTTCGCCACCCTTCCGCATTAGACATGTTTGAACAGATTACGGATGCATCCAAGGGAAAACAAATCGTCATGTTCCTCGACTACGATGGTACCTTGTCGCCTATTGTCGATGACCCCGACCGTGCTTTTATGTCGGATTCGATGAGAAAAACTGTGAGGAAACTTGCGCGGTATTTTCCTACTGCTATTGTTACCGGCAGATGCAGAGACAAGGTGTACAATTTTGTTCGCTTGGCTGAGCTGTATTATGCTGGAAGCCATGGCATGGATATTAAAGGACCAACAAGAGATTCCAAATACAATAAGGTGAGTGAACTAAACATGGAGGTTCTTTTTCAACCTGCCAGTGAATTTCTTCCCATGATGGATGAGGTGTACCATCTATTGGTTGAGAAAGTACAATCAATTCCTGGAGCCACGGTGGAGAACAACAAGTTCTGCGTCTCTGTTCATTTTCGCTGCGTTGATGAAAAGAAATGGAGTGAACTGGCACAGCAAGTGAGATCAGTGTTAAAAGAGTACCCGAAGCTTCGTCTTAGCCAAGGAAGGAAGGTACTAGAGATTCGTCCCTCTATTAAATGGGACAAAGGGAAGGCAGTGGAATTTTTGTTAGAGTCACTTGGATTTGCCAACTGTAACAATGTCTTTCCTGTTTACATTGGTGATGATAAAACCGATGAAGATGCATTCAAGAAATTAAGAGACAGAGGACAAGGTTTTGGGATTCTTGTCTCAAAATTTCCAAAGGACACTACTGCATCATACTCTTTACAAGAACCCAACGAGGTGATGGAATTCCTTCAACGTTTGGTGGAGTGGAAACAAGTATCCCTCCGAGCACGTTCCCGGGTGTAA 1113 0.4492 MTQQNVLLSKTSKSGNGIDRAITLPQKPPSAPGGYIPIPRRRVLKNLEINGDGGQRISAWLDSMRASSPTHVKSTPSFAEEHTSWILRHPSALDMFEQITDASKGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRKLARYFPTAIVTGRCRDKVYNFVRLAELYYAGSHGMDIKGPTRDSKYNKVSELNMEVLFQPASEFLPMMDEVYHLLVEKVQSIPGATVENNKFCVSVHFRCVDEKKWSELAQQVRSVLKEYPKLRLSQGRKVLEIRPSIKWDKGKAVEFLLESLGFANCNNVFPVYIGDDKTDEDAFKKLRDRGQGFGILVSKFPKDTTASYSLQEPNEVMEFLQRLVEWKQVSLRARSRV* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1218 370 MobiDBLite consensus disorder prediction 1 19 - -
Apr8g1218 370 TIGRFAM T6PP: trehalose-phosphatase 106 357 IPR003337 GO:0003824|GO:0005992
Apr8g1218 370 Pfam Trehalose-phosphatase 111 346 IPR003337 GO:0003824|GO:0005992
Apr8g1218 370 SUPERFAMILY HAD-like 109 359 IPR036412 -
Apr8g1218 370 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 370 IPR044651 GO:0004805|GO:0005992
Apr8g1218 370 CDD HAD_TPP 109 351 - -
Apr8g1218 370 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 110 322 IPR006379 -
Apr8g1218 370 MobiDBLite consensus disorder prediction 1 33 - -
Apr8g1218 370 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 370 - -
Apr8g1218 370 Gene3D - 108 193 IPR023214 -
Apr8g1218 370 Gene3D - 204 368 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1218 Apr-Chr8 17183531 17186335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1218 99 363 Trehalose Biosynthesis Gene Families AT1G06410 23.427 7.35e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1218 K01087 - gmx:100794430 608.216