Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1217 ATGGGAACAACTATAGATATGTACAATAATAATAGCAACATAGCACCGGATTTCTTAGATCCATATAGTGAAGAGCTGATGAAAGCACTTAAACCTTTTTTGAAAAGTGATTATTCATCAACTTCTCTCTCACGGGAATCACACACACTACCCAAATCGTATCCCAACCCAATCTTCTCCAACCAATCTAGTTCCCTTGGGCTCAACCAACTCACCCCATCTCAAATTCTTCAAATTCAAACCCAAATCCAAATTCGGCAGCAACAGCAGCAGCTCTACGCGGGTTCGTTCAAACCCCAAAACCAAAACCAAAACCAAAACCAAAACCAAAGCTTTCTCGCCCCAAAGCGCGTTCCTATGAAGCACGTTGGCACAAGCGCGAAACCCGGGAAGCTGTACCGTGGGGTGAGACAGCGACATTGGGGGAAGTGGGTGGCTGAGATAAGACTCCCAAAGAATCGAACCCGTCTCTGGCTTGGAACATTCGACACCGCAGAGGAAGCAGCGTTGGCATACGACAACGCAGCGTTTAAGCTTCGAGGTGAATTTGCACGCCTCAATTTCCCTCATCTGAAGCACCATGGACCCTTTGTTTTTGGCGATTTCGGAGATTACAAGCCTCTACCTTCTGCCGTCGATTCCAAGCTCCAAGCTATTTGTGAAAGCTTAGCCGTTTCGCGCAAACAGGGGAATGAAAAACAAAAACCCTTTCCCTCTGTTGAAGATGTAAAGCCTGTGATACAAGCTCCTTCGCTGGATGAGTTGGACTCTGACGTGGCACAATTCAACGGTCAACAGGATTTTCCAGAGTTCGAGGATTTTAAGGTGGAGAATCCAACGTTGTCGCCTGAATCTTCACCCGGTTCTTCTTCGCCTGAATCCGGTGTTACTTTCTTGGATTTCTCGGATTTCTCGGATTCTAATGAAATGGAGAATTTTGGGTTGGAGAAGTACCCTTCTGTGGAGATTGATTGGGCTGCTATATGA 987 0.463 MGTTIDMYNNNSNIAPDFLDPYSEELMKALKPFLKSDYSSTSLSRESHTLPKSYPNPIFSNQSSSLGLNQLTPSQILQIQTQIQIRQQQQQLYAGSFKPQNQNQNQNQNQSFLAPKRVPMKHVGTSAKPGKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAFKLRGEFARLNFPHLKHHGPFVFGDFGDYKPLPSAVDSKLQAICESLAVSRKQGNEKQKPFPSVEDVKPVIQAPSLDELDSDVAQFNGQQDFPEFEDFKVENPTLSPESSPGSSSPESGVTFLDFSDFSDSNEMENFGLEKYPSVEIDWAAI* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1217 328 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 54 - -
Apr8g1217 328 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 54 328 - -
Apr8g1217 328 CDD AP2 131 191 IPR001471 GO:0003700|GO:0006355
Apr8g1217 328 ProSiteProfiles AP2/ERF domain profile. 132 189 IPR001471 GO:0003700|GO:0006355
Apr8g1217 328 MobiDBLite consensus disorder prediction 273 303 - -
Apr8g1217 328 PRINTS Ethylene responsive element binding protein signature 133 144 IPR001471 GO:0003700|GO:0006355
Apr8g1217 328 PRINTS Ethylene responsive element binding protein signature 155 171 IPR001471 GO:0003700|GO:0006355
Apr8g1217 328 SMART rav1_2 132 195 IPR001471 GO:0003700|GO:0006355
Apr8g1217 328 SUPERFAMILY DNA-binding domain 132 190 IPR016177 GO:0003677
Apr8g1217 328 Pfam AP2 domain 133 182 IPR001471 GO:0003700|GO:0006355
Apr8g1217 328 Gene3D AP2/ERF domain 132 190 IPR036955 GO:0003700|GO:0006355
Apr8g1217 328 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 1 54 - -
Apr8g1217 328 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 54 328 - -
Apr8g1217 328 MobiDBLite consensus disorder prediction 279 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1217 Apr-Chr8 17145417 17147262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1217 5 328 AP2-EREBP Transcription Factor Family AT4G39780 48.780 2.43e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr8g1217 AP2 3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1217 K09286 - gmx:100797648 399.053