Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1189 ATGATTTGGATAGCAATTGTTTTAGTTTCTCTTACTTTTCTATGGCTATGGAGAAGCAAGAAGAATACAAAGAAATTACCACCTGGTCCAAAAGGGTTACCAATTTTAGGAAACCTTCACATGTTGGGTGCAAATCCTCATTGTGAACTTCACAAACTTGCACAAAAGCATGGACCTATCATGTACTTGCGAGTAGGTTTTGTGCCCACCATAGTTGTTTCTTCACCCCAAGCTGCTGAACTATTCCTCAAGACCCATGACCTTGTCTTTGCAAGTAGACCACCTCATGAGGCTGCAAAGCACATTGCTTGGGAAGAACGTAACCTTTGCCAAACCAAAACCAACTCCTTTAGCTCTGTGAGGGAAGAGGAACTTGACCTATTGATAAAGTTTATAAGGGAGGCAAGTTATGATGAAACTGCTGTTGATCTCAGTGCCAAAGTTGCAACACTCAGTGCTGACATATCTTGTAGAATGGTTTTCGGAAAGCATTACATGGGCCAAGACTTAGGTGGGAAGGGGTTCAAGGCTGTGCTACGAGAGGTAATGGATTTAGCAGCAATTCCTAACCTTGCTGATTACATTCCTTACTTCTTTGACAAAATTATTGATGAGCACATGCAATCAGATAAGGGAGGAGAAGACGAGATCAAGGATTTTGTGGATGTCATGTTGGGCGTTGGCTGTACTGAAGAATCTGAATACCGTTTTGAACGCTCCAATATCAAAGCCGTTTTGCTGGATATGCTGGCGGCTTCAATAGATACTACGGGTACGGCAATTGAGAGGACACTATCTGAGCTCATAAAGAATCCAAGGGTGATGAAGAAAGTGCAAATGGAGTTGGAAAGTGTGGTGGGTATGAAGAGGAAGGTGGAGGAATCAGACTTAGAGAAGTTGGAGTATTTGAACATGGTTATTAAGGAAAGCATGAGGATCCATCCGGCGTCACCGTTATTGTTACCACACCAATCAATGGAAGATTGCATGGTTGGAGAATATTTCATACCTAAGAAATCAAGGATCATAATAAACGCATGGGCTATTATGAGAGAGCCAAGTGCATGGAGTGAAGCAGAGAAGTTTTGGCCAGAGAGATTTGAGGGAAGTAACATCGATGTTAGAGGGCATGACTTTGAGTTGATACCATTTGGGTCTGGAAGAAGAGGGTGTCCTGGATTGCAATTGGGTCTAACTCTGGTTCGGATAGTAGTGGCTCAACTTGTTCATTGTTTTCATTGGAAGTTACCACATGGAATCTTGCCAACTGATTTGGACATGATCGAACATTTTGGTGTCACGGTGGGTAGAGCCAATAATCTAGTTGCTATTCCAACCTATCGCCTTAACGATGAAAGGGATTAA 1365 0.4249 MIWIAIVLVSLTFLWLWRSKKNTKKLPPGPKGLPILGNLHMLGANPHCELHKLAQKHGPIMYLRVGFVPTIVVSSPQAAELFLKTHDLVFASRPPHEAAKHIAWEERNLCQTKTNSFSSVREEELDLLIKFIREASYDETAVDLSAKVATLSADISCRMVFGKHYMGQDLGGKGFKAVLREVMDLAAIPNLADYIPYFFDKIIDEHMQSDKGGEDEIKDFVDVMLGVGCTEESEYRFERSNIKAVLLDMLAASIDTTGTAIERTLSELIKNPRVMKKVQMELESVVGMKRKVEESDLEKLEYLNMVIKESMRIHPASPLLLPHQSMEDCMVGEYFIPKKSRIIINAWAIMREPSAWSEAEKFWPERFEGSNIDVRGHDFELIPFGSGRRGCPGLQLGLTLVRIVVAQLVHCFHWKLPHGILPTDLDMIEHFGVTVGRANNLVAIPTYRLNDERD* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1189 454 PRINTS P450 superfamily signature 252 269 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1189 454 PRINTS P450 superfamily signature 305 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1189 454 PRINTS P450 superfamily signature 382 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1189 454 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 197 - -
Apr8g1189 454 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 198 450 - -
Apr8g1189 454 PANTHER CYTOCHROME P450 93A3-LIKE 198 450 - -
Apr8g1189 454 PANTHER CYTOCHROME P450 93A3-LIKE 2 197 - -
Apr8g1189 454 Pfam Cytochrome P450 27 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1189 454 Gene3D Cytochrome P450 16 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1189 454 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1189 454 PRINTS E-class P450 group I signature 304 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1189 454 PRINTS E-class P450 group I signature 345 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1189 454 PRINTS E-class P450 group I signature 381 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1189 454 PRINTS E-class P450 group I signature 391 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g1189 454 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 384 393 IPR017972 GO:0005506|GO:0016705
Apr8g1189 454 SUPERFAMILY Cytochrome P450 27 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1189 Apr-Chr8 16847430 16849258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1189 1 450 Cytochrome P450 AT3G26300 36.217 1.13e-112 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1189 K20562 - aprc:113873662 898.656