Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1174 ATGGAATACTATTTTGAAAACCCTCATAATCCAAATCACCCCAATTATGCTCACTCTATTGATATGGTTCCATCCTCCTCTGACTTCGTGCTATCCGATTATCTCATCCTCGATGATTTTGTTGATCATCAAGACTCTCAATCACAAAGCACTGAATCATCGGAGAAGGCTACCTTCAGCGATGCAAGTCATGGATTCAATGATGCAACCTCTAGGGACAATAACATAAAATGTAAAAGTGGGATAAAGCGCAGTAAGGGTGAAGAGAGTCCAAGGATCGCGTTTAGAACAAAATCAGAGCTTGAGATTATGGATGATGGATACAAGTGGAGGAAGTACGGCAAGAAGTCCGTGAAGAGCAGTCCCAATCTAAGGAACTATTACAAATGTTCAAGTGGAGGATGCAAAGTGAAGAAAAGGGTGGAAAGGGATAGAGATGACTCCAGCTATGTGATAACAACTTATGAAGGTGTGCACAATCATGAGTGCCCATTTACCACTTACTACAGCCAAATATCCGTTGTACATTCAGATGCTTTTGCATGTACCAAGTGA 555 0.4126 MEYYFENPHNPNHPNYAHSIDMVPSSSDFVLSDYLILDDFVDHQDSQSQSTESSEKATFSDASHGFNDATSRDNNIKCKSGIKRSKGEESPRIAFRTKSELEIMDDGYKWRKYGKKSVKSSPNLRNYYKCSSGGCKVKKRVERDRDDSSYVITTYEGVHNHECPFTTYYSQISVVHSDAFACTK* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1174 184 MobiDBLite consensus disorder prediction 77 93 - -
Apr8g1174 184 MobiDBLite consensus disorder prediction 45 93 - -
Apr8g1174 184 MobiDBLite consensus disorder prediction 45 76 - -
Apr8g1174 184 Gene3D WRKY domain 79 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr8g1174 184 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 12 169 - -
Apr8g1174 184 SMART WRKY_cls 104 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr8g1174 184 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 169 IPR044810 GO:0003700
Apr8g1174 184 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr8g1174 184 SUPERFAMILY WRKY DNA-binding domain 96 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr8g1174 184 ProSiteProfiles WRKY domain profile. 99 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1174 Apr-Chr8 16760339 16762563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1174 40 174 WRKY Transcription Factor Family AT5G64810 52.555 8.11e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr8g1174 WRKY 2.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1174 - - gmx:732583 257.684