Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1166 ATGGGTCCATTTACACTTTCTGTTATGGTTGAAGACTCTGCCATTTCATTACCAATTAGCATGGGAGAGGAAAGGCCATTTGACTTTTTACGCACTTTATTTGAGGGTGTTATTGCCGGAGGTACAGCTGGAGTTGTTGTTGAGACAGCTCTATACCCAATTGACACTATAAAAACACGTCTGCAGGCTGCTCGTGGAGGAGAAAAACTAATATTAAAAGGCCTTTATTCTGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCTGCTCTATTTGTTGGAGTTTATGAACCCATAAAGCAGAAATTGCTGAGGATATTTCCTGAAAGTCTGAGTGCTTTTGCTCATTTGACTGCAGGTGCCATAGGAGGCATTGCTGCTTCACTGATTCGTGTTCCAACAGAGGTTATCAAGCAACGAATGCAAACCGGGCAGTTTACTTCAGCTTCTGGTGCTGTTCGCTTTATTGCATCTAATGAAGGCTTTAAAGGATTTTATGCTGGGTATAGATCTTTTTTGTTGCGGGATTTGCCCTTTGATGCTATTCAGTTTTGCATCTATGAGCAGATTCGAATAGGCTATATGCTTGCGGCACGAAGAAATTTGAATGATCCAGAAAATGCTATTATTGGTGCTTTTGCAGGTGCACTAACTGGGGCTATAACTACCCCCCTCGATGTCATCAAGACAAGGTTGATGGTTCAGGGATCTGCAAACCAATATAAGGGAATCGTAAACTGTGTTCAAACCATTATTAAGGACGAAGGACCTGGGGCCTTTTTGAAGGGTATTGGGCCCAGAGTACTATGGATTGGCATAGGTGGTTCAATATTCTTTGGCGTCCTTGAGAGTACAAAACGTTTTCTTGCTGAGAGGCGTCCTACACTAGCTCAGCACTCATACTCAGAAGAAAGTAAAGATTCTTAG 930 0.429 MGPFTLSVMVEDSAISLPISMGEERPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPIKQKLLRIFPESLSAFAHLTAGAIGGIAASLIRVPTEVIKQRMQTGQFTSASGAVRFIASNEGFKGFYAGYRSFLLRDLPFDAIQFCIYEQIRIGYMLAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIVNCVQTIIKDEGPGAFLKGIGPRVLWIGIGGSIFFGVLESTKRFLAERRPTLAQHSYSEESKDS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1166 309 PRINTS Mitochondrial carrier protein signature 36 49 IPR002067 GO:0055085
Apr8g1166 309 PRINTS Mitochondrial carrier protein signature 49 63 IPR002067 GO:0055085
Apr8g1166 309 PRINTS Mitochondrial carrier protein signature 167 185 IPR002067 GO:0055085
Apr8g1166 309 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Apr8g1166 309 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 16 299 - -
Apr8g1166 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 207 289 IPR018108 -
Apr8g1166 309 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 16 299 - -
Apr8g1166 309 Gene3D Mitochondrial carrier domain 33 304 IPR023395 -
Apr8g1166 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 194 IPR018108 -
Apr8g1166 309 SUPERFAMILY Mitochondrial carrier 34 284 IPR023395 -
Apr8g1166 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 103 IPR018108 -
Apr8g1166 309 Pfam Mitochondrial carrier protein 111 193 IPR018108 -
Apr8g1166 309 Pfam Mitochondrial carrier protein 207 292 IPR018108 -
Apr8g1166 309 Pfam Mitochondrial carrier protein 33 67 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1166 Apr-Chr8 16712340 16719388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1166 110 295 Chloroplast and Mitochondria Gene Families AT1G07030 29.843 5.69e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1166 K15111 - gmx:100811130 537.339