Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1163 ATGAGAGGGCTATATACTGAGAATCAACATAACACTCTCTTCCTCTCACTGCTCTCACTAACATGTCTATGCATTCAGGCAACAGCAACAGCAACAGCAACAGCGTCAACCTCCACAACACAGCAACTCATGCACTTCAAAAACTCCCTCCCCAACCCATCACTCCTCCATAATTGGCTACCAACCAAACCCCAATGTTCATTCACAGGAATCACCTGTACTCACCACCACATCACTTCCATAGACCTCACCTCAATTCCCCTGTCCACAACATTCTCCGTCATCTCCACACACTTACTCACACTCCCACACCTTCACCACCTCACTCTCAAATCCACAAACCTCACTGGCACTCTCTCTTCGCTCTCCAACACCACTCTCACAACCCTTCACCTCTCCCACAACTCCCTCTCTGGTCAACTCTTTGACTTTCCCCTCACTTTGCGCCTCCTTGACCTTTCCTCCAACAACTTCTCTTCCAACCTCTCTTCCTTCCCTCAGTGCTCTTCTTTGGAATACCTCGACATCTCGGACAACTATTTCTCCGGCGATCTCTCTGTCTCTCTTTCTCCCTGTCACAACCTCGTTTACCTCAATGTCTCCGGTAACCGATTTTCCGGCACTGTCCCGGTTCTCCCCGCTGCTTCCCTTAAGTTTCTTTATCTCGCAGGAAATGATTTCCGGGGAGAATTTCCGGCCGGGCTTGCGGAGTCCTCGCCGGGGCTGGTTGAACTCGACCTCTCCTCGAACAAACTCTCTGGCCAGTTGAGGGTTGAAACCTTCGCCGAAATGAGGAGCTTGAAGAAGCTTTCCCTTTCGTTCAATGGATTCTCGGGTCCGTTGTCGGAATCTCTATCGGAATTAACGAGTTTGGAGTCTCTGCATTTGAGTTCCAACAACTTTTCGGGTTCGATACCGAGAGGGTTTTGTGAAAACGGTAAAATCAGTTTGAAAGAACTGTATTTGCAGAGCAACATGTTATGGGGTTCGATTCCAAGTACACTTGGTAACTGTTCGGAGCTTGTTGCATTGGATTTGAGTGTGAATTACTTAAAGGGTAGCATTCCTTCGAGTTTGGGGTCTCTTTCGAAGCTTCGTAGTTTGATCATTTGGATGAACAATCTTCATGGAGGAATACCACAAGAGTTGATGCATATGAAAAGCCTTGAAAAATTGATTCTTGACTTCAATGAGTTGAGCGGTGGCATTCCTTCTGGCCTAAGCAACTGCACGCGCCTGAATTGGCTCTCACTGTCGAATAACCAGCTCGCTGGCGATGTTCCGGCGTGGATTGGCCGGCTCTCTAGCCTTGCAATACTTAAATTGAGTTATAATAGCTTCTCCGGGAGGATACCCGCGGAGCTCGGCGATTGCCGGAGCTTGATATGGTTGGATATGAATACTAACATGCTGAGTGGGGCAATTCCTGCTGAGTTGTTTAAACAATCTGGTAAGATTGCGGTTAATTTCATGAGTGGGAAGAAAACATTGGCGTATGTGAGGAATGATGGGAGTAAGGAGTTTCATGGGGCTGGGAGTTTGTTGGAGTTTGAAGGGATAAGGCAAGAGCAATTGAATAGCAGGATCTCAAAGTGGAAGTTCAATAGAGTTTATCCTGGTAAGCCTCTTAGTTTTGACCATAACGGTTCCATGATTTTCTTGGATGTGTCACATAATATGTTGTCTGGTAGTATTCCTAAGGAAGTTGGAAGTATGTACTATTTGTTCATCTTGAATTTGGGGCATAACAATATATCTGGAGAAATCCCACAAGAGGTTGGGAGGTTGAGAAATCTTGGCATACTTGATCTCTCTAACAATAGGCTTGAAGGACAGATTCCACCAACCTTGACACACCTTTCCTTTCTCACTGAAATTGATTTGTCCAATAACTATCTATCAGGGTTGGTTCCTGGATCTGGACAGATTGCTGCTCTTCCTGCTAGTGGATTCCTTAATAATTCTGGTCTGTGTGGAGTTCCTCTCCCTCCATGTGGCAAAGACTCGGGAAATAGTCCTAGTGCAAGTGCTCATCATAAGAAGTCTCGGTTAAATCTTGCAGGGAATGTGGCCATGGGTTTGCTGTCTTCACTCTTTTGTGTCTTTGGTTTAATTATAATTGCCATTGAGGCAAGAAAGAGGAGGAAGAAAAGGGAAGCTGCCCTTGATGTCTATGTTGACAGTCGTCCTCATTCGGGGACAGCCAATGTTGGGTGGAAGCTTGCCAACCCACGTGAGGCGCTTAGCATAAACCTTGAAACGTTTGAGAAGTCACTTCAAAAGCTTACCTTTGCTGATCTTGTTGAAGCTACCAACGGCTTTCACAGTGACTGCATTGTTGGTTCTGGTGGTTTTGGTGTTGTGTACAAGGCTCAGTTAAAGGATGGGAGTGTCGTGGCCATCAAAAAACTGATGCATGTTAGTGGACAAGGGGATAGGGAATTTACTGCTGAAATGGAAACCATAGGGAAAATCAAACACCGGAACCTTGTTCCCCTTCTCGGCTACTGCAAGGTTGGAGAAGAAAGGCTTTTGGTTTATGAGTACATGAAATATGGAAGCCTAGACGTTTTGCATAACCAAAAGAAAGCTGGGATCAAGCTGAATTGGGCAGCAAGGAAGAAAATTGCAATTGGAGCTGCCAGAGGATTGGCCTTTCTTCACCACAATTGCACTCCACCAATAATTCATAGAGACATGAAATCAAGCAATGTTTTGCTTGATGAAGACTTGGAAGCTAGAGTTGCTGATTTTGGAATGGCAAGACGTATGAATGCTATGGATACTCATTTAAGTGTCAGCACACTAGCAGGAACTCCTGGTTATGTTCCTCCTGAATATTATCAAAGCTTTCACTGTACCACTAAAGGTGATGTTTATAGTTATGGTGTGGTTTTATTGGAGCTGCTTACAGGAAAAAAGGCAACGGATTCAACTGATTTTGGTGATGACAATCTTGTGGGATGGGTTAAACTACAAGCTAAACTGAAAAAAAGTGATGTTTTTGATCCAGAGCTGAGGAAAGAGAACCCCACTCCTGAGGTTGAGCTTGCTCAGTACTTGAATGTTGCTTTTGCTTGCTTGGATTATCCACCGTTGCAGCGTCCCTCGATGATTCAAGTGTTAGCAAGGTTTAAGGAAATCCAAGCAGGATCTACTCTAGATTCCCATTCTACCATAGCCACTGAAGATGGAGGTTTTGGTGCTGTTGAATTGGTAGAAATGAGCATAAAAGAAGCCCCTGAATTAAGCAAGAAATAG 3261 0.4496 MRGLYTENQHNTLFLSLLSLTCLCIQATATATATASTSTTQQLMHFKNSLPNPSLLHNWLPTKPQCSFTGITCTHHHITSIDLTSIPLSTTFSVISTHLLTLPHLHHLTLKSTNLTGTLSSLSNTTLTTLHLSHNSLSGQLFDFPLTLRLLDLSSNNFSSNLSSFPQCSSLEYLDISDNYFSGDLSVSLSPCHNLVYLNVSGNRFSGTVPVLPAASLKFLYLAGNDFRGEFPAGLAESSPGLVELDLSSNKLSGQLRVETFAEMRSLKKLSLSFNGFSGPLSESLSELTSLESLHLSSNNFSGSIPRGFCENGKISLKELYLQSNMLWGSIPSTLGNCSELVALDLSVNYLKGSIPSSLGSLSKLRSLIIWMNNLHGGIPQELMHMKSLEKLILDFNELSGGIPSGLSNCTRLNWLSLSNNQLAGDVPAWIGRLSSLAILKLSYNSFSGRIPAELGDCRSLIWLDMNTNMLSGAIPAELFKQSGKIAVNFMSGKKTLAYVRNDGSKEFHGAGSLLEFEGIRQEQLNSRISKWKFNRVYPGKPLSFDHNGSMIFLDVSHNMLSGSIPKEVGSMYYLFILNLGHNNISGEIPQEVGRLRNLGILDLSNNRLEGQIPPTLTHLSFLTEIDLSNNYLSGLVPGSGQIAALPASGFLNNSGLCGVPLPPCGKDSGNSPSASAHHKKSRLNLAGNVAMGLLSSLFCVFGLIIIAIEARKRRKKREAALDVYVDSRPHSGTANVGWKLANPREALSINLETFEKSLQKLTFADLVEATNGFHSDCIVGSGGFGVVYKAQLKDGSVVAIKKLMHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLDVLHNQKKAGIKLNWAARKKIAIGAARGLAFLHHNCTPPIIHRDMKSSNVLLDEDLEARVADFGMARRMNAMDTHLSVSTLAGTPGYVPPEYYQSFHCTTKGDVYSYGVVLLELLTGKKATDSTDFGDDNLVGWVKLQAKLKKSDVFDPELRKENPTPEVELAQYLNVAFACLDYPPLQRPSMIQVLARFKEIQAGSTLDSHSTIATEDGGFGAVELVEMSIKEAPELSKK* 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1163 1086 Pfam Leucine rich repeat N-terminal domain 41 73 IPR013210 -
Apr8g1163 1086 ProSitePatterns Serine/Threonine protein kinases active-site signature. 895 907 IPR008271 GO:0004672|GO:0006468
Apr8g1163 1086 Gene3D Transferase(Phosphotransferase) domain 1 852 1050 - -
Apr8g1163 1086 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 141 - -
Apr8g1163 1086 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 145 1060 - -
Apr8g1163 1086 Gene3D Ribonuclease Inhibitor 509 669 IPR032675 -
Apr8g1163 1086 Gene3D Ribonuclease Inhibitor 28 508 IPR032675 -
Apr8g1163 1086 SMART LRR_typ_2 596 619 IPR003591 -
Apr8g1163 1086 SMART LRR_typ_2 288 312 IPR003591 -
Apr8g1163 1086 SMART LRR_typ_2 386 410 IPR003591 -
Apr8g1163 1086 SMART LRR_typ_2 620 643 IPR003591 -
Apr8g1163 1086 SMART LRR_typ_2 240 263 IPR003591 -
Apr8g1163 1086 SMART LRR_typ_2 434 458 IPR003591 -
Apr8g1163 1086 PANTHER SYSTEMIN RECEPTOR SR160 145 1060 - -
Apr8g1163 1086 PANTHER SYSTEMIN RECEPTOR SR160 9 141 - -
Apr8g1163 1086 Pfam Brassinosteroid receptor island domain 484 541 IPR045381 -
Apr8g1163 1086 ProSiteProfiles Protein kinase domain profile. 774 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1163 1086 SUPERFAMILY L domain-like 539 664 - -
Apr8g1163 1086 SUPERFAMILY L domain-like 59 307 - -
Apr8g1163 1086 SMART serkin_6 774 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1163 1086 PRINTS Leucine-rich repeat signature 242 255 - -
Apr8g1163 1086 PRINTS Leucine-rich repeat signature 596 609 - -
Apr8g1163 1086 Gene3D Phosphorylase Kinase; domain 1 737 849 - -
Apr8g1163 1086 SUPERFAMILY Protein kinase-like (PK-like) 755 1044 IPR011009 -
Apr8g1163 1086 Pfam Leucine Rich repeat 123 138 IPR001611 GO:0005515
Apr8g1163 1086 Pfam Leucine rich repeat 240 301 IPR001611 GO:0005515
Apr8g1163 1086 Pfam Leucine rich repeat 412 471 IPR001611 GO:0005515
Apr8g1163 1086 Pfam Protein kinase domain 776 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1163 1086 SUPERFAMILY L domain-like 239 482 - -
Apr8g1163 1086 CDD STKc_IRAK 780 1048 - -
Apr8g1163 1086 ProSitePatterns Protein kinases ATP-binding region signature. 780 803 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1163 Apr-Chr8 16651914 16655448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1163 41 1082 Receptor kinase-like Gene Family AT4G39400 58.140 0.0 1215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Apr8g1163 Pkinase 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1163 K13415 - gmx:100499629 1291.56