Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1156 ATGGCAAGAGAGATTATGATACTTCAAACGCTTGATCATCCCAATGTCATCAAACTTGAAGGATTAGCAACATCAAGGATGCAATATAGTCTTTATCTTGTTTTTGATTACATGAAATGTGACCTTACAAGAATTATCTACCACAGTGGGGAAAGACTCACCGAACCACAGATAAAGTGTTATATGCGACAACTACTTTTGGGGCTGGAGCATTGTCATGAGAGGGGAATTATGCATAGAGATATTAAACCTTCTAACCTGTTAATAGATAAAAGAGGGGTGCTAAAAATTGCTGATTTTGGGTTAGCAAATTCTTTGGCAATAAAACCTGAAGGGCCTTTCACAAATCGAGTGGTGACACTTTGGTATAGAGCTCCTGAACTTCTTTTAGGTTCAACCCATTATGGATATGCAATTGATCTTTGGAGCATAGGATGCCTGTTAGCTGAGATGTTTCTTGGAAGACCAATTATGCCCGGAAGGACAGAGGTTGAGCAGCTTCATATGATTTTGAAACTTTGTGGTTCACCTTCAGAGGATTATTGGAAAAAAATGAAGCTAGTAACAAGCTTTCGTCCACCACAACATTATAAAGCTAAGTATGAAGAACATTTTCGCTATTTTCCTTCCTCTGCACGTGCCCTCTTAGCTACACTACTTGATCTAGACTCTGAACGTCGTGGCAGTGCTTCCTCTGCTCTTGAAAGTGAATTCTTCAAATCTAGTCCATTAGTTTGTGACATTTCAGCGTTACCAATAATAATCTACAAAGACGAGGATGAACGGTCACAAACTAAGAGACTCAAAAGGCGCAAGAGATTGAAAAATAAAGGACAAATATATCGAACAAGTACTAGCAATCCAAGCTTGTTAGGAAAGAACCAAACTGTTGAACAAAGTAGGAGAGATTCACAATCATCAAAGGAGGAAAAGAGTGTGGCACAAAACATGAAAGTTCTAAAAACAGGGAATAGTGGAAACAGCATATCGTCACTGTTTATGAACGAGAGGAGCATGAGTATGAGCATGAATGGATCAATATCCCCAGTTTTTGTCTCTAGTATGAGAAAATCCCCCAAAACTGAGGGCCATCCTAATGCTCTTAAGAACATAAAAAACTATACCCTTTTGCAAGCTTCCATAATTGATATGATCAATCACAACGAAGGCAATGAATTGGGCCATTTGCGTAGGTCCTTTTCTACGTTGGATTTTCGGCTTGATCCAGACAAGCTATCAAGTCTCTGGATCAAATAG 1257 0.3898 MAREIMILQTLDHPNVIKLEGLATSRMQYSLYLVFDYMKCDLTRIIYHSGERLTEPQIKCYMRQLLLGLEHCHERGIMHRDIKPSNLLIDKRGVLKIADFGLANSLAIKPEGPFTNRVVTLWYRAPELLLGSTHYGYAIDLWSIGCLLAEMFLGRPIMPGRTEVEQLHMILKLCGSPSEDYWKKMKLVTSFRPPQHYKAKYEEHFRYFPSSARALLATLLDLDSERRGSASSALESEFFKSSPLVCDISALPIIIYKDEDERSQTKRLKRRKRLKNKGQIYRTSTSNPSLLGKNQTVEQSRRDSQSSKEEKSVAQNMKVLKTGNSGNSISSLFMNERSMSMSMNGSISPVFVSSMRKSPKTEGHPNALKNIKNYTLLQASIIDMINHNEGNELGHLRRSFSTLDFRLDPDKLSSLWIK* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1156 418 Gene3D Transferase(Phosphotransferase) domain 1 45 283 - -
Apr8g1156 418 Gene3D Phosphorylase Kinase; domain 1 1 44 - -
Apr8g1156 418 PANTHER CELL DIVISION PROTEIN KINASE 1 378 - -
Apr8g1156 418 PANTHER CYCLIN-DEPENDENT KINASE 1 378 - -
Apr8g1156 418 MobiDBLite consensus disorder prediction 279 301 - -
Apr8g1156 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Apr8g1156 418 MobiDBLite consensus disorder prediction 264 315 - -
Apr8g1156 418 SUPERFAMILY Protein kinase-like (PK-like) 2 244 IPR011009 -
Apr8g1156 418 ProSiteProfiles Protein kinase domain profile. 1 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1156 418 Pfam Protein kinase domain 2 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1156 418 SMART serkin_6 1 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1156 Apr-Chr8 16595929 16599514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1156 3 290 Core Cell Cycle Gene Families AT5G10270 45.902 3.92e-83 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Apr8g1156 Pkinase 1.4e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1156 K08819 - gmx:102667260 619.387