Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1136 ATGGGAAAGCGAATTCGGGAGAAAGAGAGTGGAATGTCTAATGGAAATAGTAGTCATCCTACTCATCCAGGACGTGTATGGGGAATTCTTCATATTATTAAGTACCATCATTGGCGTCATGTCAAGAGAAGGCTTACACACAGGAGGCATGGTGGTGGAAGAAATGATGCAAGAGCTGAAACTTCTGATGATTCTGTTATTGATACTATGCCAGAACATTGTAATCCAGCATTGTCTAATGTTGAAGGAAAGGTGGTACACTCCACCCCACCCACAAAACATTCTATCAAATCTCGATTAAAATCACTTCTTCATGAAGATACATACAAAAAGAAGATTAGACATAAGAGAAGCTCAACTTGCCCAGCAAAGTCAGATGTAGCTCGTGCCAAATCTGTTCACCAGTTGGAAGTTGATCCACTGAGTGAATTACTATTAACTGTTGAGAGCCCTGAACCAGTGCTAGAAACCTTTCAAAACCATCTTGCAGCTGGCACATTGGAGGTATTGTCACCAGTTTTCTCTGAGAAGCCAATTGCCAACAATGACAAATGTGTGCACTGTGGCACAGCTTTTTCCAGTGACATTTCGGAACAAAGCAAAGTTCATAAGCACTTTAAATGTCCTAATCAAGGATTGCCAGAAGAGAAATCGATGAATGCGAAGATACTTACAACTGATGCTTCACCCCATCTTTTCAAGGATTTTCTTGATGCTTTGGATGTTATCAACACAAACAAGGACTTTCTGTTGAAATATATACAGGATCCAGGCTCTCCTATGCCATTCCACACTCATACTGAACAATCTTTACGCGGCAAAACAAGAAGAACCAAATCTATCTCATTTCCTATAGGCTCTTCATCAGGAAGCAAAGACACTGAAACAGGCCAACTCTTAAACCAAATGGTAGATGATTGGTTCAAGGATAAAGGGAGTGAATTACAAATTCATAGTAACATGCAAAATGATTCCAAGCCAGAGTCCTCAGAAGATATTCACCAACACTCCACATCATCAGGTTCTTCACATAAAGTTGATAAATATGATGAAGAGTATAATAAAATTTCTTCATCAGTTTCATCCCCAGTTCCTAACCAAGTGAAAACTAGGCACTTCAAGGATCTTCGAAAGAAGATGAAGCATATAATTCAAGAGAGTAAGAATGAGAAGTATCGCATTACCATGGATGCTGTACTTGACAAAATTCCTCATGGAAAGAAGCTTACCAATAATGTAAAGAAGTTGATCCATGACCAATCCAAAGACCCCAAAATTAAAGAGGAAGGTGAAGAGAGTGCCAAAAGTGGTTTTGGTAGTCATCTCTCTTCTAAATCCTTCAACAAGCGCCAACCATCAACCATGAGGACTACATCTCTAAATGCATCAGCTAGTAGATATTCTCAGTTGTATGAAACTTGTTTTAATAGTGAAATCAAATATCCTAAGGCTGAGAACTTGAGATTGAAAACTGAAGAGAGAAGTTCAGCATTAAAGACCTCAAAATCCATTAAAAGGTTTCTTTCAATGCCTAATCTTAAATCTTATTTCCACCACAGTGAGGAGCCTTCTGTTCTTTCATCCCCCCAGAATTCAATTGGGAAATTTGGTGATGGAACCGCAGGCACATGTGTCACTGATCTGCAAACGGGGTTTGATCATAGTAATGACTCAAAGAGTCAATTTCTGCCCCCTACACTTACTGATAGCTTAAATCAAGAAAGCAACTTGAATGCTGACCAAAAGCAGCTTCTTATCAGGAGTGCTTCAAAATCGGGATTTGATTTTAGTAATGAGGCCATGGCAGATGAGATCAAAGGAATTGATCATAACTTGAGACAGAGTGAACTGGACATTGGAGGTGAAACAGAGTCTACTACTATGCCAGTAGAAACAATCTCAGCCTTCTCTTCTGACAGCAGCTTCCTAGATGTTACATTTGACCTTGAGAACTTAAACATAGAAGAATCAGATACAGAATTAAAGCCAGGGCCAGATGATGGATTGGATGGTATGGCTGAAAAAGAAGAGGCTAAAATGGATCAATCTGAGTTGGTTGAGAATTTTCAGAAATTGGGAGCTCTAAGCAAGGAGTTCAACTATGAAATTCCATGTATTGAAGTGGATGCAAGTAATGAAGCTGCATTTAATTATGTGAGAAAGGTTTTGGATCTCTCTGGATTCACTGCCCATGATTCTCTTGGAATATGGTATTCTGATAACCAACCAGTTGATCCTTCATTATATGAAGAATTGGAGGGATGCTTACTTCTGGATCCTGATTGTTCAGGTAATAGTGATGAAGGTGGACAATGTAATCATCTGCTTCTGTTTGACATAATCAATGAAGGATTGTTGGAGATTTTTGGGAGATCATACAATTATTATCCAAGACCCTTGTCTTCTCTCTCCCATATTCATCCATTACCATCAGGGGACAGGGTACTCTATAAAGTATGGACACTTATTAGCTGGAATCTGAACTCACCAACAACATTTGAGCTTTACCCATCGTTGGATTACTATGTGAGCAAAGATCTAGCAAAATATGATGGCTGGATGAATTTACAATTTGATTCTGAATGTGTGGGACTTGAGTTAGATGACTTGATTTTTGATGATCTTTTGGAGGAATTAATCTACACCTAA 2649 0.3888 MGKRIREKESGMSNGNSSHPTHPGRVWGILHIIKYHHWRHVKRRLTHRRHGGGRNDARAETSDDSVIDTMPEHCNPALSNVEGKVVHSTPPTKHSIKSRLKSLLHEDTYKKKIRHKRSSTCPAKSDVARAKSVHQLEVDPLSELLLTVESPEPVLETFQNHLAAGTLEVLSPVFSEKPIANNDKCVHCGTAFSSDISEQSKVHKHFKCPNQGLPEEKSMNAKILTTDASPHLFKDFLDALDVINTNKDFLLKYIQDPGSPMPFHTHTEQSLRGKTRRTKSISFPIGSSSGSKDTETGQLLNQMVDDWFKDKGSELQIHSNMQNDSKPESSEDIHQHSTSSGSSHKVDKYDEEYNKISSSVSSPVPNQVKTRHFKDLRKKMKHIIQESKNEKYRITMDAVLDKIPHGKKLTNNVKKLIHDQSKDPKIKEEGEESAKSGFGSHLSSKSFNKRQPSTMRTTSLNASASRYSQLYETCFNSEIKYPKAENLRLKTEERSSALKTSKSIKRFLSMPNLKSYFHHSEEPSVLSSPQNSIGKFGDGTAGTCVTDLQTGFDHSNDSKSQFLPPTLTDSLNQESNLNADQKQLLIRSASKSGFDFSNEAMADEIKGIDHNLRQSELDIGGETESTTMPVETISAFSSDSSFLDVTFDLENLNIEESDTELKPGPDDGLDGMAEKEEAKMDQSELVENFQKLGALSKEFNYEIPCIEVDASNEAAFNYVRKVLDLSGFTAHDSLGIWYSDNQPVDPSLYEELEGCLLLDPDCSGNSDEGGQCNHLLLFDIINEGLLEIFGRSYNYYPRPLSSLSHIHPLPSGDRVLYKVWTLISWNLNSPTTFELYPSLDYYVSKDLAKYDGWMNLQFDSECVGLELDDLIFDDLLEELIYT* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1136 882 MobiDBLite consensus disorder prediction 419 459 - -
Apr8g1136 882 MobiDBLite consensus disorder prediction 265 296 - -
Apr8g1136 882 MobiDBLite consensus disorder prediction 276 296 - -
Apr8g1136 882 Pfam Protein of unknown function (DUF3741) 216 259 IPR022212 -
Apr8g1136 882 MobiDBLite consensus disorder prediction 419 435 - -
Apr8g1136 882 PANTHER TRM32-LIKE PROTEIN (DUF3741) 1 882 - -
Apr8g1136 882 MobiDBLite consensus disorder prediction 320 347 - -
Apr8g1136 882 MobiDBLite consensus disorder prediction 1 23 - -
Apr8g1136 882 MobiDBLite consensus disorder prediction 437 459 - -
Apr8g1136 882 Pfam Domain of unknown function (DUF4378) 716 878 IPR025486 -
Apr8g1136 882 PANTHER PROTEIN TRM32 1 882 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1136 Apr-Chr8 15929880 15933722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1136 227 872 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 34.043 2.12e-89 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1136 - - gmx:100807303 1229.93