Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1135 ATGTCTGGGGATATCAAGGAGGGGAGAGCTTTGGCAAAAGGGTATTCAGTTATTTTACTGCTATTGATTTTACTTGTTTGTTGCACTGCGGGGTTGAATACAGAGGGTCAAATCCTCCTTGAGCTTAAGAATGGACTTGATGATAAATCTAATGTTTTGGGAAATTGGAAGTTTACTGATGCAACTCCATGTGGGTGGATAGGTGTGAATTGCAGTTATGATTATAATGATAGGAATAATAATCCTGTGGTTGTGTCTCTCAATTTGAGTTCAATGAATCTTTCTGGAACTCTAAATGCTTCAAGCATTGGGGGTCTAACCCATCTAACTAATCTCAATCTTGCTTTCAACGAGCTTAATGGGAATATCCCCAAGGAGATTGGTGAGTGCTCGAGTTTGGAATATCTTTACTTGAACAACAATCAATTTGAAGGGCCAATTCCTGCTGAATTGGGTAAGTTGTCTGCTTTAGAGAGTTTGAATATTTGCAATAACAAACTCTCTGGTGTGATTCCAGAAGAGTTTGGAAACTTGTCTTCATTGGTTGAGTTGGTGGCCTACAGCAACTTTCTTGTAGGACCATTGCCTAATTCCATTGGAAACCTTAAGAATCTTGTGAATTTCAGAGCTGGGGCAAATAACATTACTGGTAGTTTGCCAAAGGAAATTAGTGGATGTAAGAGCTTAGTACGCCTTGGTCTTGCACAAAATCAGATAGGAGGGGAGTTACCAAGTGAGATTGGAATGCTTGACAGCTTAAAAGAACTGGTTTTGTGGGGGAACCAGTTGTCAGGACTTATTCCTAGAGAGATTGGGAATTGTAGCAGCCTTGAGACCCTTGCTTTATATAGTAATAATCTCGTTGGTTCTATACCTAAGGAGATTGGGAACCTCAAATCATTGAGGTGGTTATATCTTTACAGAAATAAGTTGAATGGAACCATTCCAAGGGAAATTGGAAATCTTTCTTCATGTTTAGACATTGATTTCTCAGAGAATTCATTAATAGGTGGTATCCCTTCAGAGTTTGGCAAAATAAGTGGTCTAAGTTTGCTCTTTCTCTTTGAGAACCAGCTAACTGGTGTTATACCAAATGAGTTTAGTAGCTTGAGAAACCTCACTAAACTTGACCTGTCCATAAACAATCTTACAGGTCCAATACCACTTGGCTTCCAGTATTTGACTAAAATGTATCAGTTGCAGCTTTTTGACAACTCCTTAAGTGGTGTTATTCCTCAAGGACTTGGACTTCGTAGTCCTCTCTGGGTTGTTGATTTCTCTGACAACAACTTGGCAGGAAGAATACCTCCTCATCTATGCGGAAATTCTCGGTTGATGTTGTTGAATTTGGCATCTAATCGTCTTTCTGGAAACATACCAACCGGGATACTAAACTGTGAATCATTGGCACAGTTGTTGTTGCTTGGAAATGGCCTTACTGGTGGCTTCCCTTCAGAATTGTGTAAGCTGGAGAACTTGACTGCCATTGATTTGAATGAGAACAGGTTCAGTGGTCCACTCCCTCCTGAGATAGGGAAATGCCTCAAATTGCAAAGGCTTCATATTGCAAACAATTACTTCACATTGGAGTTGCCTAAGGAAATAGGAAATCTATCTCAACTGGTGACCTTTAATGTTTCATCAAATCTTTTCAGTGGAAGAATACCACATGAAATTTTTAGGTGTCAAAGGCTCCAGAGGCTTGATCTCAGTCAGAATAACTTCACTGGTTCCTTGCCAGGTGAGATTGGAGTACTTGAGCACTTGGAGATTCTCAAGCTTTCAAACAATAAGCTGTCTGGATACATTCCTGCAGCATTAGGCAACCTGTCTCATTTGAACTGGTTGTTGATGGATGGCAATTTGTTTTTTGGTGAAATACCTCCTCAGATGGGTTCTCTTTCAAGCTTGCAAATTGCAATGGATCTCAGTTACAATAATCTTTCTGGAAGAATACCATCTCAGCTTGGCAATCTCAACATGCTTGAGTATCTCTTTCTCAATAATAACCATTTGGATGGTGAAATTCCTGGCACATTTGAAGAGCTATCAAGTTTGCTGGGGTGCAATTTCTCATACAATAACCTCTCTGGGCCTATTCCTTCCACTAAGATTTTCCAAAGTATGGCTCTAAGCAGCTTTATTGGTGGTAACAATGGCCTCTGTGGTGCACCTCTTGGTGACTGCAACACCAATCCAGCTTCTCACTCTGACCAGTCAAGGAAAGGTATTGACTCTGCACGCGCTAAAATAGTCATGATCATTGCAGCTTCTGTTGGTGGTGTTTCTCTCATTCTAATTTTAGTTATTTTATATTTTATGAGGCGTCCTAGGGAGTCTATTGATTCCTATGGAGGCACTGAGCCTCCCTCACCAGATTCAGATAACTATTTCCCTCCTCCAAAGGAAGGTTTCACATTCCAAGATCTTGTTGAAGCTACAAAAAGATTTCATGAGAGTTATGTTATTGGTAGGGGAGCATGTGGAACAGTTTATAAGGCAGTGATGAAGTCTGGTAAGACCATTGCTGTTAAGAAGTTAGCATCTAATAGGGAAGGCAACAACATTGAGAATAGTTTCAGGGCTGAGATATTGACTCTGGGAAGGATAAGGCATCGAAATATAGTGAAGTTGTATGGCTTTTGCTATCACCAGGGTTCCAATCTTCTGCTTTATGAGTACATGGAAAGAGGTAGCTTAGGTGAACTGTTGCATGGTTCTGCATGTAATCTGGAGTGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGCCTTGCTTACTTGCATCATGACTGCAAGCCAAAGATTATACATCGCGATATAAAGTCTAACAACATTCTGCTGGATGAAAATTTTGAGGCCCATGTTGGTGATTTTGGTTTAGCAAAAGTGATTGACATGCCACAGTCAAAATCTATGTCTGCAGTTGCTGGATCTTATGGCTATATTGCTCCTGAATATGCATATACCATGAAGGTCACAGAAAAGTGTGACATATATAGTTATGGTGTTGTGCTATTGGAATTGCTAACTGGAAGAACTCCAGTTCAGCCACTGGAGCAAGGAGGTGATCTTGTGACATGGGTAAGAAACCATATCCGGGACCATAACAACACATTGACACCAGGGATACTTGACAATCGTGTGGATCTTGAAGACCAAACCACCGTGAATCACATGATCACTGTTTTGAAACTTGCTTTACTATGCACAAGTGTATCTCCTTCTAAGAGGCCATCCATGAGAGAAGTTGTGTTGATGCTCATTGAGTCCAATGAGCGAGAAGGAAACTTAACACTCACTCAAACATACCATGATCTTCCTTCCAAAGATGGCATGTGA 3348 0.4074 MSGDIKEGRALAKGYSVILLLLILLVCCTAGLNTEGQILLELKNGLDDKSNVLGNWKFTDATPCGWIGVNCSYDYNDRNNNPVVVSLNLSSMNLSGTLNASSIGGLTHLTNLNLAFNELNGNIPKEIGECSSLEYLYLNNNQFEGPIPAELGKLSALESLNICNNKLSGVIPEEFGNLSSLVELVAYSNFLVGPLPNSIGNLKNLVNFRAGANNITGSLPKEISGCKSLVRLGLAQNQIGGELPSEIGMLDSLKELVLWGNQLSGLIPREIGNCSSLETLALYSNNLVGSIPKEIGNLKSLRWLYLYRNKLNGTIPREIGNLSSCLDIDFSENSLIGGIPSEFGKISGLSLLFLFENQLTGVIPNEFSSLRNLTKLDLSINNLTGPIPLGFQYLTKMYQLQLFDNSLSGVIPQGLGLRSPLWVVDFSDNNLAGRIPPHLCGNSRLMLLNLASNRLSGNIPTGILNCESLAQLLLLGNGLTGGFPSELCKLENLTAIDLNENRFSGPLPPEIGKCLKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNLFSGRIPHEIFRCQRLQRLDLSQNNFTGSLPGEIGVLEHLEILKLSNNKLSGYIPAALGNLSHLNWLLMDGNLFFGEIPPQMGSLSSLQIAMDLSYNNLSGRIPSQLGNLNMLEYLFLNNNHLDGEIPGTFEELSSLLGCNFSYNNLSGPIPSTKIFQSMALSSFIGGNNGLCGAPLGDCNTNPASHSDQSRKGIDSARAKIVMIIAASVGGVSLILILVILYFMRRPRESIDSYGGTEPPSPDSDNYFPPPKEGFTFQDLVEATKRFHESYVIGRGACGTVYKAVMKSGKTIAVKKLASNREGNNIENSFRAEILTLGRIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGELLHGSACNLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVTWVRNHIRDHNNTLTPGILDNRVDLEDQTTVNHMITVLKLALLCTSVSPSKRPSMREVVLMLIESNEREGNLTLTQTYHDLPSKDGM* 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1135 1115 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Apr8g1135 1115 SMART LRR_typ_2 298 322 IPR003591 -
Apr8g1135 1115 SMART LRR_typ_2 659 682 IPR003591 -
Apr8g1135 1115 SMART LRR_typ_2 106 130 IPR003591 -
Apr8g1135 1115 SMART LRR_typ_2 154 177 IPR003591 -
Apr8g1135 1115 SMART LRR_typ_2 370 393 IPR003591 -
Apr8g1135 1115 SMART LRR_typ_2 490 514 IPR003591 -
Apr8g1135 1115 SMART LRR_typ_2 250 274 IPR003591 -
Apr8g1135 1115 SMART LRR_typ_2 610 634 IPR003591 -
Apr8g1135 1115 SMART LRR_typ_2 586 609 IPR003591 -
Apr8g1135 1115 SMART LRR_typ_2 538 562 IPR003591 -
Apr8g1135 1115 ProSiteProfiles Protein kinase domain profile. 817 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1135 1115 Pfam Leucine rich repeat 564 622 IPR001611 GO:0005515
Apr8g1135 1115 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Apr8g1135 1115 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 1101 - -
Apr8g1135 1115 SUPERFAMILY L domain-like 52 408 - -
Apr8g1135 1115 Pfam Leucine Rich Repeat 132 154 IPR001611 GO:0005515
Apr8g1135 1115 Pfam Leucine Rich Repeat 157 178 IPR001611 GO:0005515
Apr8g1135 1115 Gene3D Ribonuclease Inhibitor 30 189 IPR032675 -
Apr8g1135 1115 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1101 - -
Apr8g1135 1115 Gene3D Ribonuclease Inhibitor 267 356 IPR032675 -
Apr8g1135 1115 SUPERFAMILY L domain-like 466 728 - -
Apr8g1135 1115 Gene3D Transferase(Phosphotransferase) domain 1 895 1108 - -
Apr8g1135 1115 Gene3D Ribonuclease Inhibitor 357 733 IPR032675 -
Apr8g1135 1115 SMART serkin_6 817 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1135 1115 ProSitePatterns Serine/Threonine protein kinases active-site signature. 938 950 IPR008271 GO:0004672|GO:0006468
Apr8g1135 1115 Gene3D Phosphorylase Kinase; domain 1 791 894 - -
Apr8g1135 1115 Gene3D Ribonuclease Inhibitor 190 266 IPR032675 -
Apr8g1135 1115 SUPERFAMILY Protein kinase-like (PK-like) 791 1090 IPR011009 -
Apr8g1135 1115 Pfam Protein kinase domain 818 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1135 Apr-Chr8 15916391 15921347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1135 32 1092 Receptor kinase-like Gene Family AT4G26540 38.981 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr8g1135 Pkinase 1.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1135 - - gmx:100805792 1909.81